RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 MED9Q9NWA0 146 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 AUP1Q9Y679 476 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 A6NLC8 198 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 MSTNO14793 375 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 ZNF205O95201 554 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 C1orf185Q5T7R7 199 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 FOXRED2Q8IWF2 684 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 FAM169BQ8N8A8 192 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 MARVELD3Q96A59 401 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 KIRREL1Q96J84 757 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 CXXC4Q9H2H0 198 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 IL36RNQ9UBH0 155 aa13.76□□□□□ -0.21
SNX6-202ENST00000396526 TRBV6-6A0A0A6YYG2 114 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 GPR31O00270 319 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 CDIPTO14735 213 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 WISP2O76076 250 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 NMBP08949 121 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 OR4A4PQ8NGN8 299 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 OR10J5Q8NHC4 309 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 RNF126Q9BV68 326 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 LIME1Q9H400 295 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 TREM2Q9NZC2 230 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 DKK4Q9UBT3 224 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 TMED3Q9Y3Q3 217 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 RHBDL1O75783 438 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 TNFSF13O75888 250 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 PDGFAP04085 211 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 CECR9P0C854 216 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 ERVS71-1P61550 626 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 SP6Q3SY56 376 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 MYPOPQ86VE0 399 aaPredicted RBP13.75□□□□□ -0.21
SNX6-202ENST00000396526 SPIN2AQ99865 258 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 SPIN2BQ9BPZ2 258 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 hCG_1807616A0A1W2PRN6 198 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 TAAR5O14804 337 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 MPPED1O15442 326 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 ZNF154Q13106 437 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 TMEM187Q14656 261 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 CCDC28AQ8IWP9 274 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 LRTM2Q8N967 370 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 CNTNAP3BQ96NU0 1288 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 HS3ST6Q96QI5 342 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 CNTNAP3Q9BZ76 1288 aa13.75□□□□□ -0.21
SNX6-202ENST00000396526 MUC6Q6W4X9 2439 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 SCTP09683 121 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 FABP6P51161 128 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 TINAGQ9UJW2 476 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 TRAPPC2LQ9UL33 140 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 CACNA1GO43497 2377 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 HSPA12AO43301 675 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 NAAAQ02083 359 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 SNTB1Q13884 538 aaKnown RBP13.74□□□□□ -0.21
SNX6-202ENST00000396526 ZNF695Q8IW36 515 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 ANGPTL6Q8NI99 470 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 RBPMSQ93062 196 aaKnown RBP13.74□□□□□ -0.21
SNX6-202ENST00000396526 RBM7Q9Y580 266 aaKnown RBP13.74□□□□□ -0.21
SNX6-202ENST00000396526 MAP1BP46821 2468 aaKnown RBP13.74□□□□□ -0.21
SNX6-202ENST00000396526 TRAV24A0A0B4J272 114 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 C3orf85A0A1B0GTC6 90 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 SCGB1D2O95969 90 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 PGA5P0DJD9 388 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 LYL1P12980 280 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 MRPL24Q96A35 216 aaKnown RBP13.74□□□□□ -0.21
SNX6-202ENST00000396526 AQP10Q96PS8 301 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 SHARPINQ9H0F6 387 aa13.74□□□□□ -0.21
SNX6-202ENST00000396526 GTF3C1Q12789 2109 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 K7EPK0 472 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 ACAA1P09110 424 aaPredicted RBP13.73□□□□□ -0.21
SNX6-202ENST00000396526 TIMP3P35625 211 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 P2RX3P56373 397 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 HLA-DRB3P79483 266 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 AANATQ16613 207 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 FAM71E2Q8N5Q1 922 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 MRPL30Q8TCC3 161 aaKnown RBP13.73□□□□□ -0.21
SNX6-202ENST00000396526 NRIP2Q9BQI9 281 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 PLEKHA2Q9HB19 425 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 KCNIP1Q9NZI2 227 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 GVINP1Q7Z2Y8 2422 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 SIRPB1O00241 398 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 RND3P61587 244 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 TIMM23BQ5SRD1 257 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 SHEQ5VZ18 495 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 RGS7BPQ6MZT1 257 aaPredicted RBP13.73□□□□□ -0.21
SNX6-202ENST00000396526 MEX3BQ6ZN04 569 aaKnown RBP13.73□□□□□ -0.21
SNX6-202ENST00000396526 BAP18Q8IXM2 172 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 RBMXL3Q8N7X1 1067 aaKnown RBP13.73□□□□□ -0.21
SNX6-202ENST00000396526 OR1S1Q8NH92 325 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 SDHAF2Q9NX18 166 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 LSM5Q9Y4Y9 91 aaKnown RBP13.73□□□□□ -0.21
SNX6-202ENST00000396526 CEP250Q9BV73 2442 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 SHANK1Q9Y566 2161 aa13.73□□□□□ -0.21
SNX6-202ENST00000396526 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
SNX6-202ENST00000396526 CGAP01215 116 aa13.72□□□□□ -0.21
SNX6-202ENST00000396526 IGLV1-44P01699 117 aa13.72□□□□□ -0.21
SNX6-202ENST00000396526 CRYAAP02489 173 aa13.72□□□□□ -0.21
SNX6-202ENST00000396526 KITLGP21583 273 aa13.72□□□□□ -0.21
SNX6-202ENST00000396526 FOXC1Q12948 553 aa13.72□□□□□ -0.21
SNX6-202ENST00000396526 DAZAP2Q15038 168 aaPredicted RBP13.72□□□□□ -0.21
SNX6-202ENST00000396526 ALKBH2Q6NS38 261 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms