RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 NRASP01111 189 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 USF2Q15853 346 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 FAM180AQ6UWF9 173 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 OSR2Q8N2R0 312 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 Q8WTZ3 238 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 POM121Q96HA1 1249 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 HSF4Q9ULV5 492 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 IGKV1-12A0A0C4DH73 117 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 IGKV1D-12P01611 117 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 UBE2KP61086 200 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 TLE1Q04724 770 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 PCOLCEQ15113 449 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 GPR157Q5UAW9 335 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 FAM27BQ5VT28 67 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 COMMD1Q8N668 190 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 ZIC4Q8N9L1 334 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 NTNG2Q96CW9 530 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 RAB39BQ96DA2 213 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 GINS3Q9BRX5 216 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 PBDC1Q9BVG4 233 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 FOXJ2Q9P0K8 574 aa12.13□□□□□ -0.47
CCHCR1-203ENST00000396268 SLC35G3Q8N808 338 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 OR1F12Q8NHA8 337 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 PIGCQ92535 297 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 MSI2Q96DH6 328 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 PRDM13Q9H4Q3 707 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 FOXD3Q9UJU5 478 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 SPTBN2O15020 2390 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 A0A087WZY1 265 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 H3BQ15 152 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 ZIC3O60481 467 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 LIFP15018 202 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 ZNF32P17041 273 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 AADACP22760 399 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 PAX6P26367 422 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 MRPS34P82930 218 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 SPIN3Q5JUX0 258 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 GPHA2Q96T91 129 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 SRXN1Q9BYN0 137 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 BOD1L1Q8NFC6 3051 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 DSCR4P56555 118 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 MALLQ13021 153 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 IL13RA2Q14627 380 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 RAB35Q15286 201 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 KHDC3LQ587J8 217 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 PLCXD3Q63HM9 321 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 C18orf12Q96KH6 178 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 LIPGQ9Y5X9 500 aa12.12□□□□□ -0.47
CCHCR1-203ENST00000396268 PCSK5Q92824 1860 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 C9orf172C9J069 976 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 BTF3P20290 206 aaKnown RBP12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 CRYGSP22914 178 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 Q3ZCU0 254 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 DCAF12Q5T6F0 453 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 ZNF610Q8N9Z0 462 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 MAGT1Q9H0U3 335 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 TMEM9BQ9NQ34 198 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 P4HTMQ9NXG6 502 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 SLC7A11Q9UPY5 501 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 A0A087X0M5 115 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 A0A1B0GX30 115 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 PHOX2AO14813 284 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 SYNGR3O43761 229 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 COX6A1P12074 109 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 TCN2P20062 427 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 OR2T2Q6IF00 324 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 YRDCQ86U90 279 aaKnown RBP12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 CCDC71LQ8N9Z2 235 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 TUBA4BQ9H853 241 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 STRAPQ9Y3F4 350 aaKnown RBP12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 AKAP13Q12802 2813 aa12.11□□□□□ -0.47
CCHCR1-203ENST00000396268 IGHV1-45A0A0A0MS14 117 aa12.1□□□□□ -0.47
CCHCR1-203ENST00000396268 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
CCHCR1-203ENST00000396268 SSR4P51571 173 aa12.1□□□□□ -0.47
CCHCR1-203ENST00000396268 TMEM217Q8N7C4 229 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms