RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 TEPPQ6URK8 271 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 Q6ZSR9 355 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 H7C1H1 209 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 K7N7A8 449 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 SPRY1O43609 319 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 SELENOTP62341 195 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 CLLU1Q5K131 121 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 PRSS54Q6PEW0 395 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 BATF2Q8N1L9 274 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 TP53I13Q8NBR0 393 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 OR2Y1Q8NGV0 311 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 CACNA1DQ01668 2161 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 SOCS7O14512 581 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 GFERP55789 205 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 MRPL22Q9NWU5 206 aaKnown RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 HIGD1AQ9Y241 93 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 CCL21O00585 134 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 DAOP14920 347 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 LOXL3P58215 753 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 PSG9Q00887 426 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 HERPUD1Q15011 391 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 CLRN3Q8NCR9 226 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 STARD4Q96DR4 205 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 VN1R1Q9GZP7 353 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM56-RWDD3S4R434 201 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 RAB29O14966 203 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 SNRPNP63162 240 aaKnown RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 GUCA2AQ02747 115 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 RELQ04864 619 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 PABPC1L2AQ5JQF8 200 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 AKR7LQ8NHP1 331 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 SCN4AP35499 1836 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 TRAV30A0A087WSZ9 112 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 A0A0B4J2E0 115 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 A0A1B0GX12 115 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 C11orf94C9JXX5 98 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 SIGLEC14Q08ET2 396 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 TWIST1Q15672 202 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 MPV17LQ2QL34 196 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 CLEC9AQ6UXN8 241 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 CXorf67Q86X51 503 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 CLEC2DQ9UHP7 191 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 LAMB2P55268 1798 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF735P0CB33 412 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 TSPAN7P41732 249 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 PMS2P11Q13670 270 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF793Q6ZN11 406 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 YIPF6Q96EC8 236 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 LOXL4Q96JB6 756 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 LHX9Q9NQ69 397 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 C20orf141Q9NUB4 165 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM196Q5HYL7 178 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 WSB2Q9NYS7 404 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-205ENST00000394768 PLXNB2O15031 1838 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 IGHV3-64DA0A0J9YX35 117 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 C3orf80F5H4A9 247 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 SYNGR1O43759 233 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF324O75467 553 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-205ENST00000394768 KLKB1P03952 638 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 INHBBP09529 407 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 MMDQ15546 238 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 HIST3H3Q16695 136 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 FAM209BQ5JX69 171 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM101Q96IK0 257 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 STARD10Q9Y365 291 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ZP3P21754 424 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 GCAP28676 217 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ECSCRQ19T08 205 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 SMDT1Q9H4I9 107 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 SLC25A10Q9UBX3 287 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-205ENST00000394768 PCOLCE2Q9UKZ9 415 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ZDHHC8Q9ULC8 765 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ARAP2Q8WZ64 1704 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 A0A1B0GU03 582 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 CXCL10P02778 98 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 GLDNQ6ZMI3 551 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ANKRD37Q7Z713 158 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 PLSCR3Q9NRY6 295 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 FAM221AA4D161 298 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF815PA8K554 130 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 RBFOX2O43251 390 aaKnown RBP eCLIP6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ARG1P05089 322 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 PRSS2P07478 247 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 GPR6P46095 362 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-205ENST00000394768 SIRT7Q9NRC8 400 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 FAM157AC9JC47 383 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 NAT2P11245 290 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 CAMPP49913 170 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 OR10G8Q8NGN5 311 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 SCNM1Q9BWG6 230 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 TBX21Q9UL17 535 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 PHLDA3Q9Y5J5 127 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 MYO7BQ6PIF6 2116 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 ZBTB42B2RXF5 422 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 CST7O76096 145 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 CTSDP07339 412 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-205ENST00000394768 OR2C3Q8N628 320 aa6.59□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM99Q8N816 258 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms