RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 OR10A7Q8NGE5 316 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 OR5D14Q8NGL3 314 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 OR13C9Q8NGT0 318 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 RPEQ96AT9 228 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 RNFT2Q96EX2 444 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 PELI1Q96FA3 418 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 MCRIP2Q9BUT9 160 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 ZFP57Q9NU63 452 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 EXOGQ9Y2C4 368 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 MYRFQ9Y2G1 1151 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 PSMB11A5LHX3 300 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 FAM172BPA6NC97 362 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 E9PQ18 207 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 J3QR06 171 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 C21orf33P30042 268 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 OR3A4PP47883 348 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 KCNJ3P48549 501 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 KRTAP10-11P60412 298 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 MRPL28Q13084 256 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 DCTN2Q13561 401 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 C10orf99Q6UWK7 81 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 OR8H3Q8N146 312 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 SYS1Q8N2H4 156 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 COMMD1Q8N668 190 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 Q8NFD4 153 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 PXT1Q8NFP0 134 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 OR5D18Q8NGL1 313 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 OR10AC1Q8NH08 325 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 HAVCR2Q8TDQ0 301 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 CHPT1Q8WUD6 406 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 DPF1Q92782 380 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 TOMM40LQ969M1 308 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 CPNE2Q96FN4 548 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 SPACA5Q96QH8 159 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 BARHL1Q9BZE3 327 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 ZMAT5Q9UDW3 170 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 DNAH9Q9NYC9 4486 aa13.87□□□□□ -0.19
SNRPA1-202ENST00000394082 TENM3Q9P273 2699 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 NPIPB11E5RHQ5 1161 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 SULT1B1O43704 296 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 ALPLP05186 524 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 TMEM225BP0DP42 221 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 THBS3P49746 956 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 RAB7AP51149 207 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 SCN1BQ07699 218 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 MADCAM1Q13477 382 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 ATXN7L3Q14CW9 347 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 RNF144BQ7Z419 303 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 MRPL41Q8IXM3 137 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 C4orf36Q96KX1 117 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 PPIL3Q9H2H8 161 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 CALYQ9NYX4 217 aa13.86□□□□□ -0.19
SNRPA1-202ENST00000394082 A0A1W2PPI3 338 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 WI2-2373I1.2A0A1W2PRP0 233 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 TMEM212A6NML5 194 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 H0YJX3 145 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 J3QLW9 94 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 CIB2O75838 187 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 IL1AP01583 271 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 ZNF19P17023 458 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 NFYBP25208 207 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 RPL23AP62750 156 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 GALEQ14376 348 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 RBM39Q14498 530 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 IL13RA2Q14627 380 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 KHDC1LQ5JSQ8 128 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 ZNF529Q6P280 563 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 ETV3LQ6ZN32 361 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 C5orf56Q8N8D9 126 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 IDI2-AS1Q9NZ38 188 aa13.85□□□□□ -0.19
SNRPA1-202ENST00000394082 MEIKINA0A087WXM9 373 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 TRAV24A0A0B4J272 114 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 SH2D7A6NKC9 451 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 IGHG2P01859 326 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 SNRNP70P08621 437 aaKnown RBP13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 HCKP08631 526 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 MYCNOSP40205 109 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 EBI3Q14213 229 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 DEFB121Q5J5C9 76 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 C9orf152Q5JTZ5 239 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 UTF1Q5T230 341 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 ZNF691Q5VV52 312 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 OR2W3Q7Z3T1 314 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 OR56B4Q8NH76 319 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 CNIH3Q8TBE1 160 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 B9D2Q9BPU9 175 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 KIF25Q9UIL4 384 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 PSG11Q9UQ72 335 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 ORC6Q9Y5N6 252 aa13.84□□□□□ -0.19
SNRPA1-202ENST00000394082 EBAG9O00559 213 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 ZFPL1O95159 310 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 CCDC159P0C7I6 412 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 GLP1RP43220 463 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 PAN3Q58A45 887 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 RSBN1Q5VWQ0 802 aaPredicted RBP13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 ASCL4Q6XD76 172 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 DRAM1Q8N682 238 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 OR13A1Q8NGR1 328 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 LGALS12Q96DT0 336 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms