RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 WFDC12Q8WWY7 111 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 PLA2G2EQ9NZK7 142 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 IFITM5A6NNB3 132 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 ABHD16AO95870 558 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 PSMB6P28072 239 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 SIRPAP78324 504 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 IQCJQ1A5X6 159 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 MCHR2Q969V1 340 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 OR2S2Q9NQN1 319 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 GSKIPQ9P0R6 139 aa16.47■□□□□ 0.23
CCDC50-202ENST00000392456 UCP2P55851 309 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 CDK5R1Q15078 307 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 HIST3H3Q16695 136 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 COL5A1-AS1Q5SY13 56 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 ABHD3Q8WU67 409 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 PDCD1LG2Q9BQ51 273 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 RNF126Q9BV68 326 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 COMMD4Q9H0A8 199 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 KCNJ16Q9NPI9 418 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 A0A087WWC5 75 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 AHRRA9YTQ3 701 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 NPIPA2E9PIF3 369 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 NPIPA3F8WFD2 350 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 UPK3AO75631 287 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 CEACAM4O75871 244 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 OPN1MWP04001 364 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 OPN1MW2P0DN77 364 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 OPN1MW3P0DN78 364 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 GTF2F2P13984 249 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 TFPI2P48307 235 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 DLK1P80370 383 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 MRPL49Q13405 166 aaKnown RBP16.46■□□□□ 0.23
CCDC50-202ENST00000392456 GABRG1Q8N1C3 465 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 OR5V1Q9UGF6 321 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 IKZF2Q9UKS7 526 aa16.46■□□□□ 0.23
CCDC50-202ENST00000392456 ZNF716A6NP11 495 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 K7EM74 188 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 VAMP5O95183 116 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 DTYMKP23919 212 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 FGF8P55075 233 aaPredicted RBP16.45■□□□□ 0.22
CCDC50-202ENST00000392456 TMEM178AQ8NBL3 297 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 C11orf40Q8WZ69 217 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 ZNF837Q96EG3 531 aaPredicted RBP16.45■□□□□ 0.22
CCDC50-202ENST00000392456 VPS25Q9BRG1 176 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 SLC35B3Q9H1N7 401 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 LUZP4Q9P127 313 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 POLR3KQ9Y2Y1 108 aaPredicted RBP16.45■□□□□ 0.22
CCDC50-202ENST00000392456 PUS1Q9Y606 427 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCDC50-202ENST00000392456 LOC105371242A0A075B767 164 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 MSGN1A6NI15 193 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 SCGNO76038 276 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 PGA5P0DJD9 388 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 CHRNB4P30926 498 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 TMEM268Q5VZI3 342 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 TMEM123Q8N131 208 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 CMBLQ96DG6 245 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 ABHD6Q9BV23 337 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 PTPRQQ9UMZ3 2332 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 DSPP15924 2871 aaKnown RBP16.45■□□□□ 0.22
CCDC50-202ENST00000392456 FREM1Q5H8C1 2179 aa16.45■□□□□ 0.22
CCDC50-202ENST00000392456 GEMIN2O14893 280 aaKnown RBP16.44■□□□□ 0.22
CCDC50-202ENST00000392456 TSPAN15O95858 294 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 ZNF708P17019 499 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 SRMP19623 302 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 CDC34P49427 236 aaPredicted RBP16.44■□□□□ 0.22
CCDC50-202ENST00000392456 C4orf17Q53FE4 359 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 SLC25A47Q6Q0C1 308 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 RNF2Q99496 336 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 NELFAQ9H3P2 528 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 METTL8Q9H825 291 aaKnown RBP16.44■□□□□ 0.22
CCDC50-202ENST00000392456 URGCP-MRPS24S4R325 110 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 NCOA6Q14686 2063 aaPredicted RBP16.44■□□□□ 0.22
CCDC50-202ENST00000392456 EDNRAP25101 427 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 TP53RKQ96S44 253 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 PCGF1Q9BSM1 259 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 SLC2A8Q9NY64 477 aa16.44■□□□□ 0.22
CCDC50-202ENST00000392456 TRBV2A0A0J9YWF9 115 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 CD3DP04234 171 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 EIF2B1Q14232 305 aaKnown RBP16.43■□□□□ 0.22
CCDC50-202ENST00000392456 DNM1P34Q6PK57 102 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 ZNF100Q8IYN0 542 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 PPP1R14AQ96A00 147 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 EIF5A2Q9GZV4 153 aaKnown RBP16.43■□□□□ 0.22
CCDC50-202ENST00000392456 AURKAIP1Q9NWT8 199 aaPredicted RBP16.43■□□□□ 0.22
CCDC50-202ENST00000392456 SPRR3Q9UBC9 169 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 STEAP1Q9UHE8 339 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 DNPH1O43598 174 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 HLA-AP01891 365 aaKnown RBP16.43■□□□□ 0.22
CCDC50-202ENST00000392456 LCATP04180 440 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 CHATP28329 748 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 APOBEC3AP31941 199 aaPredicted RBP16.43■□□□□ 0.22
CCDC50-202ENST00000392456 AADACL3Q5VUY0 350 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 UNQ9370/PRO34162Q6UXP9 181 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 MEX3BQ6ZN04 569 aaKnown RBP16.43■□□□□ 0.22
CCDC50-202ENST00000392456 OR1P1Q8NH06 330 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 SLC25A21Q9BQT8 299 aaPredicted RBP16.43■□□□□ 0.22
CCDC50-202ENST00000392456 ZDHHC11Q9H8X9 412 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 ELOVL3Q9HB03 270 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 TAF9BQ9HBM6 251 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 NOX4Q9NPH5 578 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms