RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CFHR3Q02985 330 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 GINS1Q14691 196 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 ZNF146Q15072 292 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 SPIN3Q5JUX0 258 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 SLC35D3Q5M8T2 416 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 RFESDQ8TAC1 157 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 ASB17Q8WXJ9 295 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 RFT1Q96AA3 541 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 EME1Q96AY2 570 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 COQ2Q96H96 371 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 FAM110AQ9BQ89 295 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 RSRP1Q9BUV0 290 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 TMED9Q9BVK6 235 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 HMG20AQ9NP66 347 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 CALYQ9NYX4 217 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 IDI2-AS1Q9NZ38 188 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 OR6C3Q9NZP0 311 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 SAMHD1Q9Y3Z3 626 aaKnown RBP7.46□□□□□ -1.22
IFT88-203ENST00000389373 R4GMQ9 66 aa7.46□□□□□ -1.22
IFT88-203ENST00000389373 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 LINC01619G3V211 115 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 DYNC1I1O14576 645 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 HSD17B6O14756 317 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 SYT7O43581 403 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 CCDC22O60826 627 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 GATBO75879 557 aaKnown RBP7.45□□□□□ -1.22
IFT88-203ENST00000389373 RPP14O95059 124 aaKnown RBP7.45□□□□□ -1.22
IFT88-203ENST00000389373 SERPINA3P01011 423 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 HMGN1P05114 100 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 OR5H8P0DN80 308 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 SOX6P35712 828 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 ACTR3P61158 418 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 ROM1Q03395 351 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 EBI3Q14213 229 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 ACSM6Q6P461 480 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 SATL1Q86VE3 508 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 ZNF565Q8N9K5 539 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 OR10G2Q8NGC3 310 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 LINC00476Q8WZB0 136 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 S1PR3Q99500 378 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 ADI1Q9BV57 179 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 MOB1AQ9H8S9 216 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 REEP1Q9H902 201 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 KRT84Q9NSB2 600 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 ACTR3BQ9P1U1 418 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 KIAA1456Q9P272 454 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 SNX5Q9Y5X3 404 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 TMEM14AQ9Y6G1 99 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 SORL1Q92673 2214 aa7.45□□□□□ -1.22
IFT88-203ENST00000389373 MEIKINA0A087WXM9 373 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 DHRS7CA6NNS2 312 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 G3V318 75 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 DEGS1O15121 323 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 SRSF10O75494 262 aaKnown RBP7.44□□□□□ -1.22
IFT88-203ENST00000389373 MOSP00540 346 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 OR8U9P0C7N5 309 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 SLC2A2P11168 524 aaPredicted RBP7.44□□□□□ -1.22
IFT88-203ENST00000389373 SLC2A5P22732 501 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 C21orf33P30042 268 aaPredicted RBP7.44□□□□□ -1.22
IFT88-203ENST00000389373 MAGEA2P43356 314 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 MTNR1BP49286 362 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 RBP2P50120 134 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 RAB9AP51151 201 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 F2RL1P55085 397 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 MTCP1P56278 107 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 CXCR4P61073 352 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 RUNX1Q01196 453 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 KIAA0141Q14154 515 aaPredicted RBP7.44□□□□□ -1.22
IFT88-203ENST00000389373 KIAA2026Q5HYC2 2103 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 TMEM236Q5W0B7 351 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 ZNF322Q6U7Q0 402 aaPredicted RBP7.44□□□□□ -1.22
IFT88-203ENST00000389373 CYP2R1Q6VVX0 501 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 LYPD6Q86Y78 171 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 ANKRD13BQ86YJ7 626 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 OR13A1Q8NGR1 328 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 MRGPRDQ8TDS7 321 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 FEVQ99581 238 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 OR51J1Q9H342 316 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 NEK6Q9HC98 313 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 CHCHD3Q9NX63 227 aaKnown RBP7.44□□□□□ -1.22
IFT88-203ENST00000389373 ZNF107Q9UII5 783 aaPredicted RBP7.44□□□□□ -1.22
IFT88-203ENST00000389373 KIF25Q9UIL4 384 aa7.44□□□□□ -1.22
IFT88-203ENST00000389373 IGHV4OR15-8A0A075B7B6 117 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 A0A087WW49 117 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 TRAV39A0A0B4J263 110 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 A8MZ25 164 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 ZNF736B4DX44 427 aaPredicted RBP7.43□□□□□ -1.22
IFT88-203ENST00000389373 C12orf77C9JDV5 145 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 SLC33A1O00400 549 aaPredicted RBP7.43□□□□□ -1.22
IFT88-203ENST00000389373 HSPA12AO43301 675 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 OCM2P0CE71 109 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 OCMP0CE72 109 aaPredicted RBP7.43□□□□□ -1.22
IFT88-203ENST00000389373 CNTFRP26992 372 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 HTR1FP30939 366 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 ZNF816Q0VGE8 651 aaPredicted RBP7.43□□□□□ -1.22
IFT88-203ENST00000389373 PDZK1IP1Q13113 114 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 OR2T5Q6IEZ7 315 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 Q6ZSR3 168 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 IZUMO1Q8IYV9 350 aa7.43□□□□□ -1.22
IFT88-203ENST00000389373 FAM71E2Q8N5Q1 922 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms