RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 ATP1A1-AS1Q5TC04 95 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 ZFP82Q8N141 532 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 CCDC71LQ8N9Z2 235 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 C2CD4CQ8TF44 421 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 TECTBQ96PL2 329 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 PRDM14Q9GZV8 571 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 SMCO4Q9NRQ5 59 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 PARPBPQ9NWS1 579 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 LUZP4Q9P127 313 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 FBXO9Q9UK97 447 aaPredicted RBP11.9□□□□□ -0.5
NEK4-202ENST00000383721 PCSK5Q92824 1860 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 NCKAP5O14513 1909 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 C3orf85A0A1B0GTC6 90 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 GNRHRP30968 328 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 GUK1Q16774 197 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 COLCA1Q6ZS62 124 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 HSD17B11Q8NBQ5 300 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 Q8NFD4 153 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 CLCC1Q96S66 551 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
NEK4-202ENST00000383721 FGF23Q9GZV9 251 aaPredicted RBP11.9□□□□□ -0.5
NEK4-202ENST00000383721 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 CRIM1Q9NZV1 1036 aa11.9□□□□□ -0.5
NEK4-202ENST00000383721 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 NKX2-6A6NCS4 301 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 C21orf140B9A014 251 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 LMO1P25800 156 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 CAMLGP49069 296 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 ASCL1P50553 236 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 COMMD1Q8N668 190 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 EXTL1Q92935 676 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 CPNE4Q96A23 557 aaPredicted RBP11.89□□□□□ -0.51
NEK4-202ENST00000383721 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 GPR87Q9BY21 358 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 C11orf1Q9H5F2 150 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 SLC7A10Q9NS82 523 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 C19orf12Q9NSK7 152 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 C1QTNF9BB2RNN3 333 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 C1QTNF9P0C862 333 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 FOXO1Q12778 655 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 OR56B2PQ8NGI1 322 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 BOD1Q96IK1 185 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 TMEM222Q9H0R3 208 aa11.89□□□□□ -0.51
NEK4-202ENST00000383721 MRPS18CQ9Y3D5 142 aaKnown RBP11.89□□□□□ -0.51
NEK4-202ENST00000383721 PQLC2LA1A4F0 135 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 BCL3P20749 454 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 PAX6P26367 422 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 CYB561P49447 251 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 EWSR1Q01844 656 aaKnown RBP eCLIP11.88□□□□□ -0.51
NEK4-202ENST00000383721 HMGN3Q15651 99 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 SLAMF9Q96A28 289 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 TMEM45BQ96B21 275 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 C14orf79Q96F83 325 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 PAPOLGQ9BWT3 736 aaKnown RBP11.88□□□□□ -0.51
NEK4-202ENST00000383721 EGLN1Q9GZT9 426 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 COA4Q9NYJ1 87 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 DSPP15924 2871 aaKnown RBP11.88□□□□□ -0.51
NEK4-202ENST00000383721 TRDCB7Z8K6 153 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 KLK10O43240 276 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 FOLR2P14207 255 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 ARF1P84077 181 aaKnown RBP11.88□□□□□ -0.51
NEK4-202ENST00000383721 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 C15orf54Q8N8G6 183 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 PSMF1Q92530 271 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 REPIN1Q9BWE0 567 aaKnown RBP11.88□□□□□ -0.51
NEK4-202ENST00000383721 RPS10P5Q9NQ39 176 aa11.88□□□□□ -0.51
NEK4-202ENST00000383721 NOSIPQ9Y314 301 aaKnown RBP11.88□□□□□ -0.51
NEK4-202ENST00000383721 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 NKX2-8O15522 239 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 CDS2O95674 445 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 PRH1P02810 166 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 CCL2P13500 99 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 RAB5CP51148 216 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 HABP2Q14520 560 aaPredicted RBP11.87□□□□□ -0.51
NEK4-202ENST00000383721 GNMTQ14749 295 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 NRN1LQ496H8 165 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 AWAT1Q58HT5 328 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 Q6ZS49 121 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 DPPA2Q7Z7J5 298 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 POM121Q96HA1 1249 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
NEK4-202ENST00000383721 SPACA1Q9HBV2 294 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 A0A096LPE4 126 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 A0A1W2PPZ6 126 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 MRPL33O75394 65 aaKnown RBP11.87□□□□□ -0.51
NEK4-202ENST00000383721 SERPINA7P05543 415 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 SCTP09683 121 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 CCNOP22674 350 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
NEK4-202ENST00000383721 PRDX4Q13162 271 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 SPINK14Q6IE38 97 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 FAM185AQ8N0U4 392 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 OR2C3Q8N628 320 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 HIST1H2BAQ96A08 127 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 TMEM56Q96MV1 263 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 IP6K3Q96PC2 410 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 GPHA2Q96T91 129 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms