RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 CD83Q01151 205 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
SHOX-202ENST00000381575 SERPINA12Q8IW75 414 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 SYS1Q8N2H4 156 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 PARP16Q8N5Y8 322 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 CHST4Q8NCG5 386 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 OR5D14Q8NGL3 314 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 PLPPR1Q8TBJ4 325 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 MRAPQ8TCY5 172 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 APH1BQ8WW43 257 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 ORAI1Q96D31 301 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 KIRREL1Q96J84 757 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 GPER1Q99527 375 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 LIN7BQ9HAP6 207 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
SHOX-202ENST00000381575 MEIKINA0A087WXM9 373 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 LOC100130705A0A1B0GUX0 176 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 LY6LH3BQJ8 138 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 OR2F2O95006 317 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 PF4V1P10720 104 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 CD33P20138 364 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 MTNR1BP49286 362 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 GNG10P50151 68 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 GBX2P52951 348 aaPredicted RBP11.28□□□□□ -0.6
SHOX-202ENST00000381575 DIAPH2-AS1Q14236 149 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 C16orf82Q7Z2V1 217 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 OR51T1Q8NGJ9 327 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 RFESDQ8TAC1 157 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 MRGPRDQ8TDS7 321 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 MYDGFQ969H8 173 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 AKR1E2Q96JD6 320 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 RBM14Q96PK6 669 aaKnown RBP11.28□□□□□ -0.6
SHOX-202ENST00000381575 C9orf16Q9BUW7 83 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 CALYQ9NYX4 217 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 OR6C3Q9NZP0 311 aa11.28□□□□□ -0.6
SHOX-202ENST00000381575 A0A1W2PPE3 182 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 CDRT1O95170 752 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 HTR3BO95264 441 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 RPSAP08865 295 aaKnown RBP11.27□□□□□ -0.61
SHOX-202ENST00000381575 CCDC159P0C7I6 412 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 LIMS3P0CW19 117 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 LIMS4P0CW20 117 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 RAB3AP20336 220 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 SSTR5P35346 364 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 CEACAM3P40198 252 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 ARHGDIBP52566 201 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 PRRX1P54821 245 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 RAB40BQ12829 278 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 FOXB2Q5VYV0 432 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 OR13C5Q8NGS8 318 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 OR56B4Q8NH76 319 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 UBALD1Q8TB05 177 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 CNIH3Q8TBE1 160 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 TOMM40LQ969M1 308 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 Q96MT0 163 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 RHOFQ9HBH0 211 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 NECAP2Q9NVZ3 263 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 FAM118AQ9NWS6 357 aa11.27□□□□□ -0.61
SHOX-202ENST00000381575 A0A087X0M5 115 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 A0A1B0GX30 115 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 H3BUI4 141 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 ALX3O95076 343 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 PF4P02776 101 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 SNRNP70P08621 437 aaKnown RBP11.26□□□□□ -0.61
SHOX-202ENST00000381575 CGB3P0DN86 165 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 CGB7P0DN87 165 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 ETV1P50549 477 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 HNF4GQ14541 408 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 RSU1Q15404 277 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 OR2G6Q5TZ20 316 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 RSBN1Q5VWQ0 802 aaPredicted RBP11.26□□□□□ -0.61
SHOX-202ENST00000381575 DRAM1Q8N682 238 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 OR9G1Q8NH87 305 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 RPEQ96AT9 228 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 S100A14Q9HCY8 104 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 INPP5EQ9NRR6 644 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 IDI2-AS1Q9NZ38 188 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 PSG11Q9UQ72 335 aa11.26□□□□□ -0.61
SHOX-202ENST00000381575 SIRT4Q9Y6E7 314 aaPredicted RBP11.26□□□□□ -0.61
SHOX-202ENST00000381575 J3QR06 171 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 MAGEB3O15480 346 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 MPZL2O60487 215 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 WBP4O75554 376 aaKnown RBP11.25□□□□□ -0.61
SHOX-202ENST00000381575 CLIC3O95833 236 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 IL1AP01583 271 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 MNDAP41218 407 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 HES1Q14469 280 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 ELP2Q6IA86 826 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 FAM53AQ6NSI3 398 aaPredicted RBP11.25□□□□□ -0.61
SHOX-202ENST00000381575 ZNF529Q6P280 563 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 REC114Q7Z4M0 266 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 ZNF329Q86UD4 541 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 PQLC1Q8N2U9 271 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 PXT1Q8NFP0 134 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 TMEM106AQ96A25 262 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 RBMXL1Q96E39 390 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms