RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 K7N7A8 449 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 CLN5O75503 358 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 SMIM6P0DI80 62 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 LMO1P25800 156 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 RPS23P62266 143 aaKnown RBP14□□□□□ -0.17
NKX3-1-201ENST00000380871 MRPS34P82930 218 aaKnown RBP14□□□□□ -0.17
NKX3-1-201ENST00000380871 RNF212Q495C1 297 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF565Q8N9K5 539 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 OR4D5Q8NGN0 318 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 PSMF1Q92530 271 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 MOB3AQ96BX8 217 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 HS3ST6Q96QI5 342 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 TAAR9Q96RI9 348 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 FOXB1Q99853 325 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 TRBV23-1A0A0A0MS06 115 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 B4E171 279 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 SSSCA1O60232 199 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 SERPINA7P05543 415 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 RD3LP0DJH9 198 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 HOXB1P14653 301 aaPredicted RBP14□□□□□ -0.17
NKX3-1-201ENST00000380871 ACP1P24666 158 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 TSPAN7P41732 249 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 RAB35Q15286 201 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 CXorf66Q5JRM2 361 aaPredicted RBP14□□□□□ -0.17
NKX3-1-201ENST00000380871 IL22RA1Q8N6P7 574 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 MMP24Q9Y5R2 645 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF724A8MTY0 619 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 M0R296 226 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 S100A9P06702 114 aaKnown RBP13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 SP9P0CG40 484 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 MAGEA5P43359 124 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 PSG4Q00888 419 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 CNN3Q15417 329 aaKnown RBP13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 HAGHQ16775 308 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 TMEM164Q5U3C3 297 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 GPR157Q5UAW9 335 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 PLCXD3Q63HM9 321 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 TMEM217Q8N7C4 229 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 LRTM2Q8N967 370 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 C10orf35Q96D05 121 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF286AQ9HBT8 521 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 SPTBN2O15020 2390 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 CST7O76096 145 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 PPYP01298 95 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 IGHV2-5P01817 119 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 ATP6V0CP27449 155 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 HERV-K104P61576 105 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 RUNX1Q01196 453 aa13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 PEAR1Q5VY43 1037 aaPredicted RBP13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 SEBOXQ9HB31 216 aaPredicted RBP13.99□□□□□ -0.17
NKX3-1-201ENST00000380871 PCNX2A6NKB5 2137 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 EPHA1P21709 976 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 IL13RA2Q14627 380 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 OR2G3Q8NGZ4 309 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 BCO1Q9HAY6 547 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 GLRX2Q9NS18 164 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 TMEM38BQ9NVV0 291 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 IL36RNQ9UBH0 155 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 NOSIPQ9Y314 301 aaKnown RBP13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 NCKAP5O14513 1909 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 KIAA1549Q9HCM3 1950 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 C3orf85A0A1B0GTC6 90 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF716A6NP11 495 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 MRPL33O75394 65 aaKnown RBP13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 GNRHRP30968 328 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 SPIN3Q5JUX0 258 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 SLC25A26Q70HW3 274 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 OR2C3Q8N628 320 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF251Q9BRH9 671 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 CRIM1Q9NZV1 1036 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 MIOXQ9UGB7 285 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 IGHEP01854 428 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 HLA-HP01893 362 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 GNMTQ14749 295 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 FAM209BQ5JX69 171 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF343Q6P1L6 599 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 OR1J1Q8NGS3 322 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 SLC7A10Q9NS82 523 aa13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 METTL1Q9UBP6 276 aaKnown RBP13.98□□□□□ -0.17
NKX3-1-201ENST00000380871 MPPED1O15442 326 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 PDCD6O75340 191 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 TNFSF15O95150 251 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 TMEM50AO95807 157 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 S100A8P05109 93 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 RBM11P57052 281 aaKnown RBP13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 SOHLH1Q5JUK2 328 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 LHFPL2Q6ZUX7 228 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 COMMD1Q8N668 190 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 SUMF2Q8NBJ7 301 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 H0YL77 283 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 MALLQ13021 153 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 OR1C1Q15619 314 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 TBC1D26Q86UD7 250 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 TUSC5Q8IXB3 177 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF611Q8N823 705 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 SYT3Q9BQG1 590 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 TUBA4BQ9H853 241 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 URGCP-MRPS24S4R325 110 aa13.97□□□□□ -0.17
NKX3-1-201ENST00000380871 hCG_38984A0A1B0GV85 526 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 TNFSF12O43508 249 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms