RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 IGF2RP11717 2491 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.69■□□□□ 0.74
VPS16-201ENST00000380443 SMCO1Q147U7 214 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 SPACA3Q8IXA5 215 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 RBPMSQ93062 196 aaKnown RBP19.69■□□□□ 0.74
VPS16-201ENST00000380443 BCL2L14Q9BZR8 327 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 SHARPINQ9H0F6 387 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 PCDHB10Q9UN67 800 aa19.69■□□□□ 0.74
VPS16-201ENST00000380443 MPTX1A8MV57 137 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 TAAR5O14804 337 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 DEGS1O15121 323 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 SHOXO15266 292 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 CGAP01215 116 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 TPT1P13693 172 aaKnown RBP19.68■□□□□ 0.74
VPS16-201ENST00000380443 UCNP55089 124 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 ERVK11-1P61568 191 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 RAB32Q13637 225 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 GGNBP1Q5YKI7 109 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 ZNF585AQ6P3V2 769 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 MOB1BQ7L9L4 216 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 BATF2Q8N1L9 274 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 OR5T2Q8NGG2 359 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 PCNPQ8WW12 178 aaKnown RBP19.68■□□□□ 0.74
VPS16-201ENST00000380443 ADAT1Q9BUB4 502 aaKnown RBP19.68■□□□□ 0.74
VPS16-201ENST00000380443 DNTTIP1Q9H147 329 aa19.68■□□□□ 0.74
VPS16-201ENST00000380443 PIGBOS1A0A0B4J2F0 54 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 I3L521 148 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 WDR1O75083 606 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 TNFSF13O75888 250 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 TUSC2O75896 110 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 WISP2O76076 250 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 IGLV1-44P01699 117 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 EIF5AP63241 154 aaKnown RBP19.67■□□□□ 0.74
VPS16-201ENST00000380443 IGSF11Q5DX21 431 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 CCDC28AQ8IWP9 274 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 EIF4E3Q8N5X7 224 aaKnown RBP19.67■□□□□ 0.74
VPS16-201ENST00000380443 OR4A4PQ8NGN8 299 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 STARD4Q96DR4 205 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 C18orf12Q96KH6 178 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 ZNF71Q9NQZ8 489 aaPredicted RBP19.67■□□□□ 0.74
VPS16-201ENST00000380443 SDHAF2Q9NX18 166 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 GSKIPQ9P0R6 139 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 ACACAQ13085 2346 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 TPRP12270 2363 aaKnown RBP19.67■□□□□ 0.74
VPS16-201ENST00000380443 APC2O95996 2303 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 CELSR3Q9NYQ7 3312 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 TRAV24A0A0B4J272 114 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 A0A1W2PR80 420 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 MFSD2BA6NFX1 497 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 OR5AC1P0C628 307 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 PSG7Q13046 419 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 PAN3Q58A45 887 aaKnown RBP19.67■□□□□ 0.74
VPS16-201ENST00000380443 C1QTNF12Q5T7M4 302 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 Q6P435 159 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 ZNF565Q8N9K5 539 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 SPERTQ8NA61 448 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 SCCPDHQ8NBX0 429 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 MRPL30Q8TCC3 161 aaKnown RBP19.67■□□□□ 0.74
VPS16-201ENST00000380443 KLF14Q8TD94 323 aaPredicted RBP19.67■□□□□ 0.74
VPS16-201ENST00000380443 REG4Q9BYZ8 158 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 TMEM100Q9NV29 134 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 IL36RNQ9UBH0 155 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 TMED3Q9Y3Q3 217 aa19.67■□□□□ 0.74
VPS16-201ENST00000380443 CACNA1GO43497 2377 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 PGA5P0DJD9 388 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 KCNJ3P48549 501 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 OR8G1Q15617 311 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 BEX5Q5H9J7 111 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 SPIN3Q5JUX0 258 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 FIP1L1Q6UN15 594 aaKnown RBP19.66■□□□□ 0.74
VPS16-201ENST00000380443 HSD17B13Q7Z5P4 300 aaPredicted RBP19.66■□□□□ 0.74
VPS16-201ENST00000380443 LDLRAD3Q86YD5 345 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 OR8G5Q8NG78 346 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 OR1S1Q8NH92 325 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 DOCK7Q96N67 2140 aa19.66■□□□□ 0.74
VPS16-201ENST00000380443 MPPED1O15442 326 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 KITLGP21583 273 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 FOXF2Q12947 444 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 SNTB1Q13884 538 aaKnown RBP19.65■□□□□ 0.74
VPS16-201ENST00000380443 PHLDA2Q53GA4 152 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 BHLHA15Q7RTS1 189 aaPredicted RBP19.65■□□□□ 0.74
VPS16-201ENST00000380443 ZNF610Q8N9Z0 462 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 MSI2Q96DH6 328 aaKnown RBP19.65■□□□□ 0.74
VPS16-201ENST00000380443 CCDC120Q96HB5 630 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 NRIP2Q9BQI9 281 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 OR5AC2Q9NZP5 309 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 URB1O60287 2271 aaKnown RBP19.65■□□□□ 0.74
VPS16-201ENST00000380443 GPR31O00270 319 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 RHBDL1O75783 438 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 HOXD4P09016 255 aaPredicted RBP19.65■□□□□ 0.74
VPS16-201ENST00000380443 ZNF146Q15072 292 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 KRTCAP3Q53RY4 240 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 CXorf67Q86X51 503 aaPredicted RBP19.65■□□□□ 0.74
VPS16-201ENST00000380443 GLYATL2Q8WU03 294 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 MRPL24Q96A35 216 aaKnown RBP19.65■□□□□ 0.74
VPS16-201ENST00000380443 RRNAD1Q96FB5 475 aaKnown RBP19.65■□□□□ 0.74
VPS16-201ENST00000380443 ZNF488Q96MN9 340 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 SSUH2Q9Y2M2 353 aa19.65■□□□□ 0.74
VPS16-201ENST00000380443 SCTP09683 121 aa19.64■□□□□ 0.73
VPS16-201ENST00000380443 DUSP1P28562 367 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms