RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SPIN2BQ9BPZ2 258 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 P4HTMQ9NXG6 502 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 A0A087WZY1 265 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 IGLV3-32A0A0A0MS00 114 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 THNSL2Q86YJ6 484 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 OR5R1Q8NH85 324 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 PLPPR1Q8TBJ4 325 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 TMEM54Q969K7 222 aa14.24□□□□□ -0.13
TRIM39-201ENST00000376656 DHHO43323 396 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 CYB5R3P00387 301 aaPredicted RBP14.23□□□□□ -0.13
TRIM39-201ENST00000376656 TAS2R30P59541 319 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 CNN3Q15417 329 aaKnown RBP14.23□□□□□ -0.13
TRIM39-201ENST00000376656 SSX2Q16385 188 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 ASCL4Q6XD76 172 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF442Q9H7R0 627 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF665Q9H7R5 613 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 CA14Q9ULX7 337 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 LOC102725191A0A1B0GVB3 256 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 PDCD6O75340 191 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 EXT1Q16394 746 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 PRAMEF20Q5VT98 475 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 OR5L2Q8NGL0 311 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 ATP5SQ99766 215 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 SNRPCP09234 159 aaKnown RBP14.23□□□□□ -0.13
TRIM39-201ENST00000376656 CD38P28907 300 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 ID3Q02535 119 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 MALLQ13021 153 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 ZNF818PQ6ZRF7 136 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 FOXL2NBQ6ZUU3 175 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 STX12Q86Y82 276 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 OR10G4Q8NGN3 311 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 UCN2Q96RP3 112 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 CLEC1BQ9P126 229 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 PITPNC1Q9UKF7 332 aa14.23□□□□□ -0.13
TRIM39-201ENST00000376656 CFAP54Q96N23 3096 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 H3BP45 60 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 TNFSF12O43508 249 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 PAX9P55771 341 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 BAXQ07812 192 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 NMSQ5H8A3 153 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 SPOCK3Q9BQ16 436 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 C2orf88Q9BSF0 95 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 CABLES2Q9BTV7 478 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 MTIF3Q9H2K0 278 aaKnown RBP14.22□□□□□ -0.13
TRIM39-201ENST00000376656 MTCH2Q9Y6C9 303 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 LMO7DNF2Z398 122 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 HLA-HP01893 362 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 GZMBP10144 247 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 LHFPL2Q6ZUX7 228 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 PLXDC1Q8IUK5 500 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 GAPTQ8N292 157 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 OR4X1Q8NH49 305 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 MYOTQ9UBF9 498 aa14.22□□□□□ -0.13
TRIM39-201ENST00000376656 A0A1W2PR77 199 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 MKRN2OSH3BPM6 223 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 NRASP01111 189 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 TCN2P20062 427 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 CRYGSP22914 178 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 FGF8P55075 233 aaPredicted RBP14.21□□□□□ -0.13
TRIM39-201ENST00000376656 DAZAP2Q15038 168 aaPredicted RBP14.21□□□□□ -0.13
TRIM39-201ENST00000376656 JOSD1Q15040 202 aaPredicted RBP14.21□□□□□ -0.13
TRIM39-201ENST00000376656 LCN15Q6UWW0 184 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 HIPK2Q9H2X6 1198 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 VSIRQ9H7M9 311 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 CDH20Q9HBT6 801 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 SDF2L1Q9HCN8 221 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 TMEM242Q9NWH2 141 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 TRBV24-1A0A075B6N3 115 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 OR7C1O76099 320 aaPredicted RBP14.21□□□□□ -0.13
TRIM39-201ENST00000376656 LCATP04180 440 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 BCL2P10415 239 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 NR2C1P13056 603 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 TMEM211Q6ICI0 200 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 FIP1L1Q6UN15 594 aaKnown RBP14.21□□□□□ -0.13
TRIM39-201ENST00000376656 DPPA3Q6W0C5 159 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 FAM185AQ8N0U4 392 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 RSG1Q9BU20 258 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 GPR87Q9BY21 358 aa14.21□□□□□ -0.13
TRIM39-201ENST00000376656 PTRH2Q9Y3E5 179 aaKnown RBP14.21□□□□□ -0.13
TRIM39-201ENST00000376656 AMBPP02760 352 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 CD55P08174 381 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 MMP9P14780 707 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 H3F3AP84243 136 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 PNRC1Q12796 327 aaPredicted RBP14.21□□□□□ -0.14
TRIM39-201ENST00000376656 NKAIN1Q4KMZ8 207 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 ZNF774Q6NX45 483 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 TMEM183AQ8IXX5 376 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 ZNF664Q8N3J9 261 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 RPRMQ9NS64 109 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 CISD1Q9NZ45 108 aaKnown RBP14.21□□□□□ -0.14
TRIM39-201ENST00000376656 DKKL1Q9UK85 242 aa14.21□□□□□ -0.14
TRIM39-201ENST00000376656 TRAV1-1A0A0B4J248 108 aa14.2□□□□□ -0.14
TRIM39-201ENST00000376656 IGKV1D-13A0A0B4J2D9 117 aa14.2□□□□□ -0.14
TRIM39-201ENST00000376656 A8MWP6 167 aa14.2□□□□□ -0.14
TRIM39-201ENST00000376656 IGKV1-13P0DP09 117 aa14.2□□□□□ -0.14
TRIM39-201ENST00000376656 TMEM267Q0VDI3 215 aaPredicted RBP14.2□□□□□ -0.14
TRIM39-201ENST00000376656 SSX7Q7RTT5 188 aa14.2□□□□□ -0.14
TRIM39-201ENST00000376656 C7orf61Q8IZ16 206 aa14.2□□□□□ -0.14
TRIM39-201ENST00000376656 ABHD14BQ96IU4 210 aa14.2□□□□□ -0.14
TRIM39-201ENST00000376656 TMEM106CQ9BVX2 250 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms