RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 OR5L1Q8NGL2 311 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 RNASEH2CQ8TDP1 164 aaKnown RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 NXT1Q9UKK6 140 aaKnown RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 ANKUB1A6NFN9 424 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 ZNF705GA8MUZ8 300 aaPredicted RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 CDX4O14627 284 aaPredicted RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 DKK1O94907 266 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 ZNF728P0DKX0 622 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 SFTPDP35247 375 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 DAP3P51398 398 aaKnown RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 NOVA1P51513 510 aaKnown RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 RND2P52198 227 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 RRADP55042 308 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 HSF1Q00613 529 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 OR2C3Q8N628 320 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 OR14L1PQ8NHC6 308 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 MSI2Q96DH6 328 aaKnown RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 LIN37Q96GY3 246 aaPredicted RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 ACTR3CQ9C0K3 210 aaPredicted RBP11.18□□□□□ -0.62
MSH5-204ENST00000375755 PPP1R14DQ9NXH3 145 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 ANXA10Q9UJ72 324 aa11.18□□□□□ -0.62
MSH5-204ENST00000375755 FAM230AA0A1W2PPH8 454 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 FAM221AA4D161 298 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 ACP1P24666 158 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 FXYD4P59646 89 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 RPL23AP62750 156 aaKnown RBP11.17□□□□□ -0.62
MSH5-204ENST00000375755 ABCA11PQ4W5N1 156 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 C17orf78Q8N4C9 275 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 OR5L2Q8NGL0 311 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 OR4X1Q8NH49 305 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 CALHM2Q9HA72 323 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 ELL3Q9HB65 397 aaPredicted RBP11.17□□□□□ -0.62
MSH5-204ENST00000375755 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 E9PLN8 166 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 GABRR1P24046 479 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 CD200P41217 278 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 RPP30P78346 268 aaKnown RBP11.17□□□□□ -0.62
MSH5-204ENST00000375755 RUNX1Q01196 453 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 ZNF266Q14584 549 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 SLC10A1Q14973 349 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 ZNF880Q6PDB4 577 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 LRTM2Q8N967 370 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 OR4D5Q8NGN0 318 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 IMMP1LQ96LU5 166 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 SNHG12Q9BXW3 62 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 C11orf1Q9H5F2 150 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 SLC7A11Q9UPY5 501 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 POLR1DQ9Y2S0 133 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 LOXL2Q9Y4K0 774 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 CHCHD2Q9Y6H1 151 aaPredicted RBP11.17□□□□□ -0.62
MSH5-204ENST00000375755 MYO7BQ6PIF6 2116 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 DOCK10Q96BY6 2186 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 CLDN34H7C241 214 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 ZNF25P17030 456 aaPredicted RBP11.17□□□□□ -0.62
MSH5-204ENST00000375755 CDAP32320 146 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 OPRM1P35372 400 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 BIDP55957 195 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 GNMTQ14749 295 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 FAM57BQ71RH2 274 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 LRP11Q86VZ4 500 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 OR11L1Q8NGX0 322 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 HAS2Q92819 552 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 SPACA9Q96E40 222 aaPredicted RBP11.17□□□□□ -0.62
MSH5-204ENST00000375755 MOB1AQ9H8S9 216 aa11.17□□□□□ -0.62
MSH5-204ENST00000375755 C19orf25Q9UFG5 118 aaPredicted RBP11.17□□□□□ -0.62
MSH5-204ENST00000375755 NCKAP5O14513 1909 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 RTTNQ86VV8 2226 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 B4DEV8 164 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 ZNF814B7Z6K7 855 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 CD59P13987 128 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 EPHA1P21709 976 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 OTX2P32243 289 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 ZP4Q12836 540 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 H1FNTQ75WM6 255 aaPredicted RBP11.16□□□□□ -0.62
MSH5-204ENST00000375755 TM2D1Q9BX74 207 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 WDR54Q9H977 334 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 PLEKHJ1Q9NW61 149 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 A0A1B0GU03 582 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 TGOLN2O43493 480 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 PITX3O75364 302 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 JMJD7P0C870 316 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 CCL3P10147 92 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 Q0VFX4 171 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 TRA2AQ13595 282 aaKnown RBP eCLIP11.16□□□□□ -0.62
MSH5-204ENST00000375755 PLPPR5Q32ZL2 321 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 ABLIM2Q6H8Q1 611 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 TMEM123Q8N131 208 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 RNF138Q8WVD3 245 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 METTL9Q9H1A3 318 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 SLC2A9Q9NRM0 540 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 GLRX2Q9NS18 164 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 ZNF581Q9P0T4 197 aa11.16□□□□□ -0.62
MSH5-204ENST00000375755 TRBV24-1A0A075B6N3 115 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 LOC102723996A0A087X1L8 192 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 ZNF850A8MQ14 1090 aa11.15□□□□□ -0.62
MSH5-204ENST00000375755 RER1O15258 196 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms