RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 MGMTP16455 207 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 PSMA1P25786 263 aaKnown RBP13□□□□□ -0.33
C11orf88-202ENST00000375618 PSMB9P28065 219 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 TRAM1Q15629 374 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 C17orf58Q2M2W7 97 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 KCTD21Q4G0X4 260 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 PRAMEF5Q5TYX0 476 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 SIGIRRQ6IA17 410 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 RBMS3Q6XE24 437 aaKnown RBP13□□□□□ -0.33
C11orf88-202ENST00000375618 FAM216AQ8WUB2 273 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 CORO2AQ92828 525 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 FAM46BQ96A09 425 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 SLC25A28Q96A46 364 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 JMJD8Q96S16 334 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 S100A13Q99584 98 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 DPCDQ9BVM2 203 aaPredicted RBP13□□□□□ -0.33
C11orf88-202ENST00000375618 TNFRSF19Q9NS68 423 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 KIF25Q9UIL4 384 aa13□□□□□ -0.33
C11orf88-202ENST00000375618 AK6Q9Y3D8 172 aaKnown RBP13□□□□□ -0.33
C11orf88-202ENST00000375618 A0A1W2PPH5 198 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 TRIM77I1YAP6 450 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 SLC22A1O15245 554 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 ZNF780AO75290 641 aaPredicted RBP12.99□□□□□ -0.33
C11orf88-202ENST00000375618 IGHV4-59P01825 116 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 VSIG8P0DPA2 414 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 CALRP27797 417 aaKnown RBP12.99□□□□□ -0.33
C11orf88-202ENST00000375618 QRFPP83859 136 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 LHFPL4Q7Z7J7 247 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 RTN4RL2Q86UN3 420 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 LDLRAD3Q86YD5 345 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 OR13A1Q8NGR1 328 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 ZFAND2BQ8WV99 257 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 ZDHHC16Q969W1 377 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 Q96M66 194 aa12.99□□□□□ -0.33
C11orf88-202ENST00000375618 RCC2Q9P258 522 aaKnown RBP12.99□□□□□ -0.33
C11orf88-202ENST00000375618 UBE2J1Q9Y385 318 aaPredicted RBP12.99□□□□□ -0.33
C11orf88-202ENST00000375618 TRGV10A0A0A0MS01 117 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 TRDV1A0A1B0GX56 115 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 MEIOCA2RUB1 952 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 ODF3BA8MYP8 253 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 CLDN34H7C241 214 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 CCRL2O00421 344 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
C11orf88-202ENST00000375618 RBP4P02753 201 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 RNASE1P07998 156 aaKnown RBP12.98□□□□□ -0.33
C11orf88-202ENST00000375618 OMGP23515 440 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 OR10A3P58181 314 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 UNC119Q13432 240 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 GPR176Q14439 515 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 P2RY14Q15391 338 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 MPV17LQ2QL34 196 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 TRAPPC6BQ86SZ2 158 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 DYNAPQ8N1N2 210 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 SELENOIQ9C0D9 397 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 HEXA-AS1Q9H8Q6 139 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 ZNRD1Q9P1U0 126 aa12.98□□□□□ -0.33
C11orf88-202ENST00000375618 FAM172BPA6NC97 362 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 ARL6IP5O75915 188 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 CLPXO76031 633 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 HTR2CP28335 458 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 IER3P46695 156 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 PAX5Q02548 391 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 MIDNQ504T8 468 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 ATAD3CQ5T2N8 411 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 C22orf42Q6IC83 251 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 LINC00596Q86U02 117 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 NR2C2APQ86WQ0 139 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 OR11H6Q8NGC7 330 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 DYRK2Q92630 601 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 FCGR1BQ92637 280 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 FOXRED1Q96CU9 486 aaPredicted RBP12.97□□□□□ -0.33
C11orf88-202ENST00000375618 MRPS24Q96EL2 167 aaKnown RBP12.97□□□□□ -0.33
C11orf88-202ENST00000375618 CHIAQ9BZP6 476 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 SLITRK2Q9H156 845 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 TAS2R3Q9NYW6 316 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 SESN1Q9Y6P5 492 aa12.97□□□□□ -0.33
C11orf88-202ENST00000375618 MEIKINA0A087WXM9 373 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 A0A0A6YYD4 124 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 hCG_1809904A0A1W2PP81 198 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 A0A1W2PPE2 198 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 A0A1W2PR64 198 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 A0A1W2PRV1 198 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 FUOMA2VDF0 154 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 FAM90A8PA6NJQ4 464 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 TMEM14DPA8MWL7 114 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 SLC17A2O00624 439 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 MPIG6BO95866 241 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 CDK2P24941 298 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 GLP1RP43220 463 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 CLDN12P56749 244 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 PLA2G7Q13093 441 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 NEDD8Q15843 81 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 SYT6Q5T7P8 510 aaPredicted RBP12.96□□□□□ -0.33
C11orf88-202ENST00000375618 ZNF626Q68DY1 528 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 HEPN1Q6WQI6 88 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 OR6M1Q8NGM8 313 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 MRGPRDQ8TDS7 321 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 NICN1Q9BSH3 213 aa12.96□□□□□ -0.33
C11orf88-202ENST00000375618 TMEM133Q9H2Q1 129 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms