RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZNF718Q3SXZ3 478 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 PHLDA2Q53GA4 152 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 CLLU1Q5K131 121 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 TIMM23BQ5SRD1 257 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 Q6ZR03 302 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 SLC38A6Q8IZM9 456 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 RSRP1Q9BUV0 290 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 LINC00862A6NCI5 91 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 ZNF83P51522 516 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 MBNL2Q5VZF2 373 aaKnown RBP16.61■□□□□ 0.25
HDAC1-201ENST00000373548 POC1AQ8NBT0 407 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 GALNT14Q96FL9 552 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 C2orf50Q96LR7 162 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 SLX1AQ9BQ83 275 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 RNF126Q9BV68 326 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 PIEZO1Q92508 2521 aa16.61■□□□□ 0.25
HDAC1-201ENST00000373548 IGKV1-6A0A0C4DH72 117 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.6■□□□□ 0.25
HDAC1-201ENST00000373548 BET1O15155 118 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 GFRA3O60609 400 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 B3GALNT1O75752 331 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 NXPH2O95156 264 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 OR2H2O95918 312 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 HOXD4P09016 255 aaPredicted RBP16.6■□□□□ 0.25
HDAC1-201ENST00000373548 IL15RAQ13261 267 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 ZNF880Q6PDB4 577 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 ACOT7LQ6ZUV0 252 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 C11orf53Q8IXP5 236 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 CISD2Q8N5K1 135 aaKnown RBP16.6■□□□□ 0.25
HDAC1-201ENST00000373548 OR11L1Q8NGX0 322 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 VRK1Q99986 396 aaPredicted RBP16.6■□□□□ 0.25
HDAC1-201ENST00000373548 GSX2Q9BZM3 304 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 RASL12Q9NYN1 266 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 DMXL2Q8TDJ6 3036 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 TRBV6-7A0A0A0MS04 114 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 H0YIZ8 118 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 TK1P04183 234 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 OR5AC1P0C628 307 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 GCH1P30793 250 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 TMEM187Q14656 261 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 SP6Q3SY56 376 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 ZGRF1Q86YA3 2104 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 CXXC4Q9H2H0 198 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 KCNIP3Q9Y2W7 256 aa16.6■□□□□ 0.25
HDAC1-201ENST00000373548 SIRPB1O00241 398 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 SLC33A1O00400 549 aaPredicted RBP16.59■□□□□ 0.25
HDAC1-201ENST00000373548 ACAA1P09110 424 aaPredicted RBP16.59■□□□□ 0.25
HDAC1-201ENST00000373548 ZNF146Q15072 292 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 PAN3Q58A45 887 aaKnown RBP16.59■□□□□ 0.25
HDAC1-201ENST00000373548 BEX5Q5H9J7 111 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 ALKBH2Q6NS38 261 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 SLC51BQ86UW2 128 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 C1orf174Q8IYL3 243 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 CITED4Q96RK1 184 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 MSL2Q9HCI7 577 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 MSRB2Q9Y3D2 182 aa16.59■□□□□ 0.25
HDAC1-201ENST00000373548 RCC1P18754 421 aaPredicted RBP16.58■□□□□ 0.25
HDAC1-201ENST00000373548 ALKAL2Q6UX46 152 aa16.58■□□□□ 0.25
HDAC1-201ENST00000373548 ZNF826PQ6ZT77 177 aa16.58■□□□□ 0.25
HDAC1-201ENST00000373548 DOLPP1Q86YN1 238 aa16.58■□□□□ 0.25
HDAC1-201ENST00000373548 HES4Q9HCC6 221 aa16.58■□□□□ 0.25
HDAC1-201ENST00000373548 CEP295Q9C0D2 2601 aa16.58■□□□□ 0.25
HDAC1-201ENST00000373548 MAP1BP46821 2468 aaKnown RBP16.58■□□□□ 0.24
HDAC1-201ENST00000373548 M0R1B8 84 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 KCNAB3O43448 404 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 TUSC2O75896 110 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 DIRAS3O95661 229 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 CTXN2P0C2S0 81 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 MSMPQ1L6U9 139 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 PLPPR1Q8TBJ4 325 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 DCUN1D4Q92564 292 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 MRPL24Q96A35 216 aaKnown RBP16.58■□□□□ 0.24
HDAC1-201ENST00000373548 SYT3Q9BQG1 590 aa16.58■□□□□ 0.24
HDAC1-201ENST00000373548 RP1L1Q8IWN7 2480 aaPredicted RBP16.57■□□□□ 0.24
HDAC1-201ENST00000373548 LEUTXA8MZ59 168 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 BCL2L11O43521 198 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 SPDEFO95238 335 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 KCNJ3P48549 501 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 RAB14P61106 215 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 SPIN3Q5JUX0 258 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 PRAMEF6Q5VXH4 476 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 GGNBP1Q5YKI7 109 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 PCSK4Q6UW60 755 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 FAM219AQ8IW50 185 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 CCDC71LQ8N9Z2 235 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 INO80EQ8NBZ0 244 aaPredicted RBP16.57■□□□□ 0.24
HDAC1-201ENST00000373548 SUCNR1Q9BXA5 334 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 TLNRD1Q9H1K6 362 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 GSKIPQ9P0R6 139 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 AUP1Q9Y679 476 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 A0A1B0GWJ7 208 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 KANTRA0A1W2PQU2 76 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 A8MXE2 369 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 LYL1P12980 280 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 GNRHRP30968 328 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 MDH2P40926 338 aaKnown RBP16.57■□□□□ 0.24
HDAC1-201ENST00000373548 HLA-DRB3P79483 266 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 RAB32Q13637 225 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 SHEQ5VZ18 495 aa16.57■□□□□ 0.24
HDAC1-201ENST00000373548 RGS7BPQ6MZT1 257 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms