RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 LINC00574Q9H8X3 128 aa12.94□□□□□ -0.34
VMA21-202ENST00000370361 FGF20Q9NP95 211 aaPredicted RBP12.94□□□□□ -0.34
VMA21-202ENST00000370361 KBTBD11-OT1A0A1B0GTJ5 212 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 IRGMA1A4Y4 181 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 BUB1B-PAK6H3BSN5 160 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 FAM106CPP0CH98 169 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 C21orf33P30042 268 aaPredicted RBP12.93□□□□□ -0.34
VMA21-202ENST00000370361 BLCAPP62952 87 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 ZNF529Q6P280 563 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 DHRSXQ8N5I4 330 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 Q8NFD4 153 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 OR10A7Q8NGE5 316 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 OR5D18Q8NGL1 313 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 OR9G1Q8NH87 305 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 CNIH3Q8TBE1 160 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 SLC25A33Q9BSK2 321 aa12.93□□□□□ -0.34
VMA21-202ENST00000370361 ISG20L2Q9H9L3 353 aaKnown RBP12.93□□□□□ -0.34
VMA21-202ENST00000370361 PAK1IP1Q9NWT1 392 aaPredicted RBP12.93□□□□□ -0.34
VMA21-202ENST00000370361 MMP23AO75900 390 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 LIMS3P0CW19 117 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 LIMS4P0CW20 117 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 CD83Q01151 205 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 SCN1BQ07699 218 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 CDK5R1Q15078 307 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 TPTE2P1Q5T6R2 138 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 LINC00596Q86U02 117 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 THNSL2Q86YJ6 484 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 SETD9Q8NE22 299 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 OR5AU1Q8NGC0 362 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 OR4X2Q8NGF9 303 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 GPR148Q8TDV2 347 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 COQ2Q96H96 371 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 SPACA5Q96QH8 159 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 GPER1Q99527 375 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 MMP28Q9H239 520 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 DCLRE1BQ9H816 532 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 NECAP2Q9NVZ3 263 aa12.92□□□□□ -0.34
VMA21-202ENST00000370361 TSSC4Q9Y5U2 329 aaPredicted RBP12.92□□□□□ -0.34
VMA21-202ENST00000370361 PRKDCP78527 4128 aaKnown RBP12.92□□□□□ -0.34
VMA21-202ENST00000370361 KIAA2026Q5HYC2 2103 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 ADARB2-AS1A8MUL3 147 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 E9PI62 339 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 H0YJX3 145 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 LY6LH3BQJ8 138 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 DUS4LO95620 317 aaKnown RBP12.91□□□□□ -0.34
VMA21-202ENST00000370361 CALCBP10092 127 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 DCKP27707 260 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 PAN3Q58A45 887 aaKnown RBP12.91□□□□□ -0.34
VMA21-202ENST00000370361 RPL22L1Q6P5R6 122 aaKnown RBP12.91□□□□□ -0.34
VMA21-202ENST00000370361 TMPRSS11AQ6ZMR5 421 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
VMA21-202ENST00000370361 WFDC9Q8NEX5 89 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 RPEQ96AT9 228 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 ZNF286AQ9HBT8 521 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 IL36GQ9NZH8 169 aa12.91□□□□□ -0.34
VMA21-202ENST00000370361 IL1AP01583 271 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 CGB3P0DN86 165 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 CGB7P0DN87 165 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 PF4V1P10720 104 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 CAPGP40121 348 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 RAB7AP51149 207 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 PPP3R1P63098 170 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 MED21Q13503 144 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 ATXN7L3Q14CW9 347 aaPredicted RBP12.9□□□□□ -0.34
VMA21-202ENST00000370361 RSU1Q15404 277 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 C17orf58Q2M2W7 97 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 NHLRC3Q5JS37 347 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 ASCL4Q6XD76 172 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 OR8H3Q8N146 312 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 TNFAIP8L1Q8WVP5 186 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 TOMM40LQ969M1 308 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 KIRREL1Q96J84 757 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 PDCD1LG2Q9BQ51 273 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 CALYQ9NYX4 217 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 MOB4Q9Y3A3 225 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 HSPE1-MOB4S4R3N1 261 aa12.9□□□□□ -0.34
VMA21-202ENST00000370361 MEIKINA0A087WXM9 373 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 PIN1P1O15428 100 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 ZNF780AO75290 641 aaPredicted RBP12.89□□□□□ -0.35
VMA21-202ENST00000370361 CD33P20138 364 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 GLP1RP43220 463 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 ETV1P50549 477 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 SLC35A2P78381 396 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 MADCAM1Q13477 382 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 Q6ZS46 218 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 OR5M11Q96RB7 305 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 GPR61Q9BZJ8 451 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 TMEM138Q9NPI0 162 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 IDI2-AS1Q9NZ38 188 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 NKX1-2Q9UD57 310 aaPredicted RBP12.89□□□□□ -0.35
VMA21-202ENST00000370361 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
VMA21-202ENST00000370361 TRAV24A0A0B4J272 114 aa12.88□□□□□ -0.35
VMA21-202ENST00000370361 TCRBV4S1A1TA0A5B7 111 aa12.88□□□□□ -0.35
VMA21-202ENST00000370361 FAM90A18PA6NE21 464 aa12.88□□□□□ -0.35
VMA21-202ENST00000370361 FAM90A16PA6NEW6 464 aa12.88□□□□□ -0.35
VMA21-202ENST00000370361 FAM90A20PA6NIJ5 464 aa12.88□□□□□ -0.35
VMA21-202ENST00000370361 FAM90A9PA6NNJ1 464 aa12.88□□□□□ -0.35
VMA21-202ENST00000370361 FAM90A12PA8MX19 464 aa12.88□□□□□ -0.35
VMA21-202ENST00000370361 FAM90A5PA8MXJ8 464 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms