RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 A6NHS1 94 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 HSPB6O14558 160 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 CA11O75493 328 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 SCGNO76038 276 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 SNRPBP14678 240 aaKnown RBP12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 DYNC1I2Q13409 638 aaKnown RBP12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 ATXN7L3Q14CW9 347 aaPredicted RBP12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 KRBOX4Q5JUW0 171 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 SIGIRRQ6IA17 410 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 CMTM4Q8IZR5 234 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 FAM185AQ8N0U4 392 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 BPIFB2Q8N4F0 458 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 NDNFQ8TB73 568 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 NICN1Q9BSH3 213 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 TMPRSS13Q9BYE2 586 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 C7orf69Q9H7B7 122 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF581Q9P0T4 197 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 HSF4Q9ULV5 492 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 KPTNQ9Y664 436 aa12.82□□□□□ -0.36
PRPF38B-202ENST00000370022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.82□□□□□ -0.367e-8■■■□□ 17.2
PRPF38B-202ENST00000370022 H3BMQ9 156 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF701M0R085 212 aaPredicted RBP12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 CHATP28329 748 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 AESQ08117 197 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 TMEM200BQ69YZ2 307 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 C1orf122Q6ZSJ8 110 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 OR4M1Q8NGD0 313 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 LGALS14Q8TCE9 139 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 NEK7Q8TDX7 302 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 ACOT12Q8WYK0 555 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 AP3S1Q92572 193 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 COQ2Q96H96 371 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 NDUFA13Q9P0J0 144 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 SPATA2Q9UM82 520 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 AUP1Q9Y679 476 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 LINC00312Q9Y6C7 94 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 ABCA1O95477 2261 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 ACANP16112 2415 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 SMIM31A0A1B0GVY4 71 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 hCG_1809904A0A1W2PP81 198 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 A0A1W2PPE2 198 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 A0A1W2PR64 198 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 A0A1W2PRV1 198 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 M0R1W7 72 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 PAHP00439 452 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 HNF1AP20823 631 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 SOX6P35712 828 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 VEGFCP49767 419 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 EFNB2P52799 333 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 CR1LQ2VPA4 569 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 NKAPLQ5M9Q1 402 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 METTL11BQ5VVY1 283 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 RSBN1Q5VWQ0 802 aaPredicted RBP12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 SLC35E4Q6ICL7 350 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 RBM38Q9H0Z9 239 aaKnown RBP12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 PLEKHJ1Q9NW61 149 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 OR6C3Q9NZP0 311 aa12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 UBE2J1Q9Y385 318 aaPredicted RBP12.81□□□□□ -0.36
PRPF38B-202ENST00000370022 TRGV10A0A0A0MS01 117 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 A0A0A6YYD4 124 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 TMEM30CPA0ZSE6 113 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 ODAMA1E959 279 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 FOXI3A8MTJ6 420 aaPredicted RBP12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 SOCS1O15524 211 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF182P17025 639 aaPredicted RBP12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 GLIPR1P48060 266 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 PLA2G7Q13093 441 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 SPCS2Q15005 226 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 ARL6IP1Q15041 203 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 TPRX1Q8N7U7 411 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF565Q8N9K5 539 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 CORO2AQ92828 525 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 WDFY2Q96P53 400 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 ATG5Q9H1Y0 275 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 RHBDL2Q9NX52 303 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 ONECUT1Q9UBC0 465 aa12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 RSL24D1Q9UHA3 163 aaKnown RBP12.8□□□□□ -0.36
PRPF38B-202ENST00000370022 DOCK11Q5JSL3 2073 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 RBP4P02753 201 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 ARF6P62330 175 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 BRICD5Q6PL45 260 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 METAP1DQ6UB28 335 aaPredicted RBP12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF497Q6ZNH5 498 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 Q6ZTK2 550 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 C6orf201Q7Z4U5 140 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 GAPTQ8N292 157 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 OR10R2Q8NGX6 335 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 PLPPR1Q8TBJ4 325 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 PHF21AQ96BD5 680 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 RAB3CQ96E17 227 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 CMTM3Q96MX0 182 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 ZNF714Q96N38 554 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 TSC22D3Q99576 134 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 SIRPDQ9H106 197 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 METTL8Q9H825 291 aaKnown RBP12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
PRPF38B-202ENST00000370022 OPN4Q9UHM6 478 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms