RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 WNT1P04628 370 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 KLK1P06870 262 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 SLC35G6P0C7Q6 338 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 HMGA2P52926 109 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 H2BFSP57053 126 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 TMEM176BQ3YBM2 270 aaPredicted RBP4.38□□□□□ -1.71
UBE3D-202ENST00000369746 EEF1DP3Q658K8 133 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 PWWP2BQ6NUJ5 590 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 FAM71F2Q6NXP2 309 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 Q6ZSR3 168 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 CLEC20AQ6ZU45 233 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 CBLL1Q75N03 491 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 H2BFWTQ7Z2G1 175 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 TBC1D26Q86UD7 250 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 PNKDQ8N490 385 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 C8orf31Q8N9H6 132 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 OR5D16Q8NGK9 328 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 OR10G9Q8NGN4 311 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 GEMIN6Q8WXD5 167 aaKnown RBP4.38□□□□□ -1.71
UBE3D-202ENST00000369746 SEH1LQ96EE3 360 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 LYSMD1Q96S90 227 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 SLC25A21Q9BQT8 299 aaPredicted RBP4.38□□□□□ -1.71
UBE3D-202ENST00000369746 ABHD14AQ9BUJ0 271 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 SLC17A9Q9BYT1 436 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 C6orf106Q9H6K1 298 aaPredicted RBP4.38□□□□□ -1.71
UBE3D-202ENST00000369746 ELL3Q9HB65 397 aaPredicted RBP4.38□□□□□ -1.71
UBE3D-202ENST00000369746 FRRS1LQ9P0K9 344 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 CLN8Q9UBY8 286 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF107Q9UII5 783 aaPredicted RBP4.38□□□□□ -1.71
UBE3D-202ENST00000369746 DNAJC15Q9Y5T4 150 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 A0A0C4DFX4 3053 aa4.38□□□□□ -1.71
UBE3D-202ENST00000369746 A0A0B4J2A0 478 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 G3V4G9 280 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 NDUFB8O95169 186 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TIAF1O95411 115 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 HLA-HP01893 362 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 MT-ND4P03905 459 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 PRNPP04156 253 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 CTSLP07711 333 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ADH4P08319 380 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 IL3P08700 152 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ESDP10768 282 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 FBLP22087 321 aaKnown RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 GATA3P23771 443 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TNFSF9P41273 254 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 RPL29P47914 159 aaKnown RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SLC6A8P48029 635 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SULT1A2P50226 295 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 FUT6P51993 359 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 POLR2HP52434 150 aaKnown RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF121P58317 390 aaPredicted RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 HIST1H3AP68431 136 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SRSF3P84103 164 aaKnown RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 RAB40BQ12829 278 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 KIAA0040Q15053 153 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TMEM183BQ1AE95 376 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF585BQ52M93 769 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 OR4A47Q6IF82 309 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 PRSS54Q6PEW0 395 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SLC25A47Q6Q0C1 308 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 GLT6D1Q7Z4J2 308 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 NIT1Q86X76 327 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 COX18Q8N8Q8 333 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 OR8G5Q8NG78 346 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 MS4A6EQ96DS6 147 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 FEVQ99581 238 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 IKZF5Q9H5V7 419 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TAS2R8Q9NYW2 309 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 COMMD9Q9P000 198 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TESQ9UGI8 421 aaKnown RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 NAT8Q9UHE5 227 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SHPKQ9UHJ6 478 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 JPT1Q9UK76 154 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 SLC17A4Q9Y2C5 497 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 MRPS16Q9Y3D3 137 aaKnown RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 USP34Q70CQ2 3546 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 LOC100289279A0A1B0GTE1 492 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 LRP5LA4QPB2 252 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 PSMB11A5LHX3 300 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 OR5B21A6NL26 309 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 K7ESM1 405 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TMPRSS2O15393 492 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TRGC1P0CF51 173 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 HIST1H1EP10412 219 aaKnown RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 CMPK1P30085 196 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 KIR2DL2P43627 348 aaPredicted RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TSFMP43897 325 aaKnown RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 GPR1P46091 355 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 DIO3P55073 304 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ST3GAL3Q11203 375 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ELOBQ15370 118 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ACKR1Q16570 336 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 TMEM69Q5SWH9 247 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 C12orf73Q69YU5 71 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ANKRD16Q6P6B7 361 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 WDR74Q6RFH5 385 aaPredicted RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ZNF705AQ6ZN79 300 aaPredicted RBP4.37□□□□□ -1.71
UBE3D-202ENST00000369746 COX15Q7KZN9 410 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 ADGRE4PQ86SQ3 457 aa4.37□□□□□ -1.71
UBE3D-202ENST00000369746 BEST3Q8N1M1 668 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms