RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 FUOMA2VDF0 154 aa18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 MMP23AO75900 390 aa18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 OR7C1O76099 320 aaPredicted RBP18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 RNASE1P07998 156 aaKnown RBP18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 TAF9Q16594 264 aa18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 LINC00596Q86U02 117 aa18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 SUMF2Q8NBJ7 301 aa18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 MRPS24Q96EL2 167 aaKnown RBP18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 BANF2Q9H503 90 aa18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 NDUFB11Q9NX14 153 aa18.27■□□□□ 0.51
ECHDC1-203ENST00000368291 COX7A1P24310 79 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 PAX5Q02548 391 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 MPV17LQ2QL34 196 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 MIDNQ504T8 468 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 RSBN1Q5VWQ0 802 aaPredicted RBP18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 GLT8D1Q68CQ7 371 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 ZNF773Q6PK81 442 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 CD200R1LQ6Q8B3 271 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 TRAPPC6BQ86SZ2 158 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 FOXRED1Q96CU9 486 aaPredicted RBP18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 DPCDQ9BVM2 203 aaPredicted RBP18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 ZMAT3Q9HA38 289 aaKnown RBP18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 ZNRD1Q9P1U0 126 aa18.26■□□□□ 0.51
ECHDC1-203ENST00000368291 TRGV10A0A0A0MS01 117 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 RRP9O43818 475 aaKnown RBP18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 FBP1P09467 338 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 CGB3P0DN86 165 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 CGB7P0DN87 165 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 MGMTP16455 207 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 Q96M66 194 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 NCOR1P1Q9H4R4 102 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 TAS2R3Q9NYW6 316 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 KIF25Q9UIL4 384 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 FAM96BQ9Y3D0 163 aa18.25■□□□□ 0.51
ECHDC1-203ENST00000368291 ARL6IP5O75915 188 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 CLPXO76031 633 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 IGHV4-59P01825 116 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 GDNFP39905 211 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 IER3P46695 156 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 C17orf58Q2M2W7 97 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 KCTD21Q4G0X4 260 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 BAIAP2L2Q6UXY1 529 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 OR11H6Q8NGC7 330 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 SLC25A28Q96A46 364 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 SLITRK2Q9H156 845 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 RCC2Q9P258 522 aaKnown RBP18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 GHRLQ9UBU3 117 aa18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 AK6Q9Y3D8 172 aaKnown RBP18.24■□□□□ 0.51
ECHDC1-203ENST00000368291 ODF3BA8MYP8 253 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 SLC22A1O15245 554 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 CALRP27797 417 aaKnown RBP18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 KCNJ3P48549 501 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 LDLRAD2Q5SZI1 272 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 SIGIRRQ6IA17 410 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 BRICD5Q6PL45 260 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 TMEM86BQ8N661 226 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 OR13A1Q8NGR1 328 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 SSMEM1Q8WWF3 244 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 FCGR1BQ92637 280 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 CYYR1Q96J86 154 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 BARHL1Q9BZE3 327 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 CHIAQ9BZP6 476 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 SELENOIQ9C0D9 397 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 TNFRSF19Q9NS68 423 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 POMT1Q9Y6A1 747 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 SESN1Q9Y6P5 492 aa18.23■□□□□ 0.51
ECHDC1-203ENST00000368291 STAB1Q9NY15 2570 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 SHISA3A0PJX4 238 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 TMEM89A2RUT3 159 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 FAM90A8PA6NJQ4 464 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 CCRL2O00421 344 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 CRTAPO75718 401 aaPredicted RBP18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 VSIG8P0DPA2 414 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 PAX6P26367 422 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 PSMB9P28065 219 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 HTR2CP28335 458 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 QRFPP83859 136 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 ATAD3CQ5T2N8 411 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 PRAMEF5Q5TYX0 476 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 ZNF626Q68DY1 528 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 OR10K2Q6IF99 312 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 C16orf87Q6PH81 154 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 HEPN1Q6WQI6 88 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 LHFPL4Q7Z7J7 247 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 OR13D1Q8NGV5 346 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 TAF15Q92804 592 aaKnown RBP eCLIP18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 FAM46BQ96A09 425 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 TMEM133Q9H2Q1 129 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 GAL3ST2Q9H3Q3 398 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 KCNK15Q9H427 330 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 OR6C3Q9NZP0 311 aa18.22■□□□□ 0.51
ECHDC1-203ENST00000368291 MEIKINA0A087WXM9 373 aa18.21■□□□□ 0.51
ECHDC1-203ENST00000368291 TRDV1A0A1B0GX56 115 aa18.21■□□□□ 0.51
ECHDC1-203ENST00000368291 UBBP0CG47 229 aa18.21■□□□□ 0.51
ECHDC1-203ENST00000368291 OMGP23515 440 aa18.21■□□□□ 0.51
ECHDC1-203ENST00000368291 CDK2P24941 298 aa18.21■□□□□ 0.51
ECHDC1-203ENST00000368291 ACTG1P63261 375 aa18.21■□□□□ 0.51
ECHDC1-203ENST00000368291 SLC35E4Q6ICL7 350 aa18.21■□□□□ 0.51
ECHDC1-203ENST00000368291 BEND2Q8NDZ0 799 aa18.21■□□□□ 0.51
ECHDC1-203ENST00000368291 OR6M1Q8NGM8 313 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms