RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PHOX2AO14813 284 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 CXCL13O43927 109 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HOXA5P20719 270 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 S100GP29377 79 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 GAMTQ14353 236 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 ELOBQ15370 118 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 TESK1Q15569 626 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 CRIP3Q6Q6R5 217 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 RABEPKQ7Z6M1 372 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 WDR5BQ86VZ2 330 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 LURAP1LQ8IV03 231 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 ZNF100Q8IYN0 542 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 C1orf87Q8N0U7 546 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 LYPD6BQ8NI32 183 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 MOB3AQ96BX8 217 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 INTS12Q96CB8 462 aaKnown RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 ZNF665Q9H7R5 613 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 GLRX2Q9NS18 164 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 DMRT1Q9Y5R6 373 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 TRAV39A0A0B4J263 110 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 A0A0J9YW62 118 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 SMCO3A2RU48 225 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 FOXI3A8MTJ6 420 aaPredicted RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 TSTD3H0UI37 97 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 YKT6O15498 198 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BKO60814 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BJP06899 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 SRP19P09132 144 aaKnown RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BOP23527 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BBP33778 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 GPM6AP51674 278 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 SUCLG1P53597 346 aaKnown RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BDP58876 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BCP62807 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST2H2BEQ16778 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 ZNF787Q6DD87 383 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 ZNF818PQ6ZRF7 136 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 MYPOPQ86VE0 399 aaPredicted RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BHQ93079 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 GNPNAT1Q96EK6 184 aaPredicted RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 ZNF845Q96IR2 970 aaPredicted RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BNQ99877 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2BMQ99879 126 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 CABLES2Q9BTV7 478 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 UFSP2Q9NUQ7 469 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 KIAA1456Q9P272 454 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HS3ST3B1Q9Y662 390 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 R4GN57 208 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 A0A1B0GV90 55 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 RBMXL2O75526 392 aaKnown RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 METTL15P1P0C7V9 234 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 TRGC1P0CF51 173 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 RNF224P0DH78 156 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 LTBRP36941 435 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 CARD18P57730 90 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 SRPXP78539 464 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HLA-DRB3P79483 266 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 HIKESHIQ53FT3 197 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 ZNF468Q5VIY5 522 aaPredicted RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 SSC4DQ8WTU2 575 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 NABP1Q96AH0 204 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 CHRNA10Q9GZZ6 450 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 TMEM222Q9H0R3 208 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 IL36RNQ9UBH0 155 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 MAP1BP46821 2468 aaKnown RBP7.07□□□□□ -1.28
CD46-208ENST00000367042 PRRC2CQ9Y520 2896 aaKnown RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 ZNF729A6NN14 1252 aaPredicted RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 SEC14L6B5MCN3 397 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 PROB1E7EW31 1015 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 PITX3O75364 302 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 VAMP5O95183 116 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 CDS2O95674 445 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 HBE1P02100 147 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 SOD3P08294 240 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 PGA5P0DJD9 388 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 IDH3GP51553 393 aaPredicted RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 FUT6P51993 359 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 STARD6P59095 220 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 RPS16P62249 146 aaKnown RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 CCL7P80098 99 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 RAB35Q15286 201 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 KHDC3LQ587J8 217 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 OR8G2PQ6IF36 304 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 ZNF574Q6ZN55 896 aaPredicted RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 RPUSD4Q96CM3 377 aaKnown RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 HIST1H2AAQ96QV6 131 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 ARHGAP21Q5T5U3 1957 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 PPIHO43447 177 aaKnown RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 BCL3P20749 454 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 RBM11P57052 281 aaKnown RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 ICAM4Q14773 271 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 RAB30Q15771 203 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 KCNMB1Q16558 191 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 WDR25Q64LD2 544 aaPredicted RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 C17orf82Q86X59 251 aaPredicted RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 ADPRHL1Q8NDY3 354 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 OR4D5Q8NGN0 318 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 OR1K1Q8NGR3 316 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 HPSE2Q8WWQ2 592 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms