RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 CALYQ9NYX4 217 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 HSD17B6O14756 317 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 AESQ08117 197 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 WDR25Q64LD2 544 aaPredicted RBP7.73□□□□□ -1.17
UPF2-202ENST00000357604 HSF4Q9ULV5 492 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 FAM25EA8MYX2 175 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 SUB1P53999 127 aaKnown RBP eCLIP7.73□□□□□ -1.17
UPF2-202ENST00000357604 ARF6P62330 175 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 TEX36Q5VZQ5 186 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 LIAT1Q6ZQX7 453 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 TGIF2LXQ8IUE1 241 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 DEDD2Q8WXF8 326 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 TBL2Q9Y4P3 447 aaKnown RBP7.73□□□□□ -1.17
UPF2-202ENST00000357604 SPTBP11277 2137 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 MED6O75586 246 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 PSG2P11465 335 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 MC5RP33032 325 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 TMEM267Q0VDI3 215 aaPredicted RBP7.73□□□□□ -1.17
UPF2-202ENST00000357604 TMEM42Q69YG0 159 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 OR10V1Q8NGI7 309 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 SLC25A28Q96A46 364 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 PGLYRP3Q96LB9 341 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 ZNF355PQ9NSJ1 428 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 PFDN2Q9UHV9 154 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 ZNF503-AS2A6NEH8 195 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 H3BMQ9 156 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 CD5LO43866 347 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 DANCRP0C864 163 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 PIGYQ3MUY2 71 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 KHDC1LQ5JSQ8 128 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 C17orf107Q6ZR85 190 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 FOXRED2Q8IWF2 684 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 LYG1Q8N1E2 194 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 MINDY2Q8NBR6 621 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 SECTM1Q8WVN6 248 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 GTF3AQ92664 365 aaKnown RBP7.73□□□□□ -1.17
UPF2-202ENST00000357604 INSIG2Q9Y5U4 225 aa7.73□□□□□ -1.17
UPF2-202ENST00000357604 OOSP1A8MZH6 123 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 PET100P0DJ07 73 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 BMI1P35226 326 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 MINOS1Q5TGZ0 78 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 WDFY1Q8IWB7 410 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 OR4C13Q8NGP0 309 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 ABHD14AQ9BUJ0 271 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 MINOS1-NBL1R4GNA1 71 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 IGHV2-70DA0A0C4DH43 119 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 SCAF4O95104 1147 aaKnown RBP7.72□□□□□ -1.17
UPF2-202ENST00000357604 ACKR3P25106 362 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 DUSP1P28562 367 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 MMP15P51511 669 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 TAS2R20P59543 309 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 PRAMEF5Q5TYX0 476 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 ABHD12Q8N2K0 398 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 VSTM2AQ8TAG5 236 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 SDSLQ96GA7 329 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 FKBP11Q9NYL4 201 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 LYNX1G3V0Z9 82 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 SHOXO15266 292 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 HRASP01112 189 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 LYNX1P0DP58 116 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 ALDH3B2P48448 385 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 OR51A4Q8NGJ6 313 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 ARHGAP5-AS1Q96IT6 56 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 AK3Q9UIJ7 227 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 SRSF10O75494 262 aaKnown RBP7.72□□□□□ -1.17
UPF2-202ENST00000357604 FAAP24Q9BTP7 215 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 HIPK2Q9H2X6 1198 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 TNFRSF19Q9NS68 423 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 CCDC88CQ9P219 2028 aa7.72□□□□□ -1.17
UPF2-202ENST00000357604 GABARAPH6UMI1 98 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 FABP1P07148 127 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 IGFBP2P18065 325 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 PLET1Q6UQ28 207 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 PNKDQ8N490 385 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 THAP7Q9BT49 309 aaPredicted RBP7.71□□□□□ -1.17
UPF2-202ENST00000357604 TLNRD1Q9H1K6 362 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 J3QRK9 145 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 RAB29O14966 203 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 TCF21O43680 179 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 IGHV2-5P01817 119 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 HOXA1P49639 335 aaPredicted RBP7.71□□□□□ -1.17
UPF2-202ENST00000357604 VMO1Q7Z5L0 202 aa7.71□□□□□ -1.17
UPF2-202ENST00000357604 MSI2Q96DH6 328 aaKnown RBP7.71□□□□□ -1.17
UPF2-202ENST00000357604 TMEM11P17152 192 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 OR10A3P58181 314 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 Q3ZCU0 254 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 SLC25A42Q86VD7 318 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 FAM216BQ8N7L0 139 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 TMEM229BQ8NBD8 167 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 OR10AC1Q8NH08 325 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 YIPF5Q969M3 257 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 UPRTQ96BW1 309 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 Q96M66 194 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 WDFY2Q96P53 400 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 GAFA1Q96PS6 74 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 ZNF107Q9UII5 783 aaPredicted RBP7.71□□□□□ -1.18
UPF2-202ENST00000357604 CEPT1Q9Y6K0 416 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 IGHV2-70P01814 119 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 PMP2P02689 132 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 RBP4P02753 201 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms