RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FUT7Q11130 342 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 ADAT3Q96EY9 351 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-201ENST00000356083 KIRREL2Q6UWL6 708 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 BVESQ8NE79 360 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 HARBI1Q96MB7 349 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 BEX4Q9NWD9 120 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-201ENST00000356083 NPAP1Q9NZP6 1156 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 DDOSTP39656 456 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 MEGF10Q96KG7 1140 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 CGB2Q6NT52 195 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 OR1L6Q8NGR2 347 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 OR10J6PQ8NGY7 276 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 SPAG8Q99932 426 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-201ENST00000356083 IGHV3OR16-10A0A075B7F0 116 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 C3orf85A0A1B0GTC6 90 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 RAB29O14966 203 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 B9D1Q9UPM9 204 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 SNRPGP15A8MWD9 76 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 PYCARD-AS1I3L0S3 204 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 CLDN10P78369 228 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 ZNF117Q03924 483 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 GPR61Q9BZJ8 451 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 CORTO00230 105 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 HOXC11O43248 304 aaPredicted RBP15.31■□□□□ 0.04
COL27A1-201ENST00000356083 GABRB1P18505 474 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 GALNSP34059 522 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 MMDQ15546 238 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 MEIG1Q5JSS6 88 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 MRPL54Q6P161 138 aaKnown RBP15.31■□□□□ 0.04
COL27A1-201ENST00000356083 SSX8Q7RTT4 187 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 IGHV4-34P06331 123 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 CCR5P51681 352 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 RICTORQ6R327 1708 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 CST2P09228 141 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 FAM53BQ14153 422 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 ANKRD55Q3KP44 614 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 CITED2Q99967 270 aaPredicted RBP15.31■□□□□ 0.04
COL27A1-201ENST00000356083 KLK15Q9H2R5 256 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 AURKAIP1Q9NWT8 199 aaPredicted RBP15.31■□□□□ 0.04
COL27A1-201ENST00000356083 OR4S2Q8NH73 311 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
COL27A1-201ENST00000356083 IGHV5-51A0A0C4DH38 117 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 MYOM1P52179 1685 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 IFITM10A6NMD0 228 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 TMEM128Q5BJH2 165 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 ZDHHC8Q9ULC8 765 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 SMAGPQ0VAQ4 97 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 CMPK2Q5EBM0 449 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 MRPS11P82912 194 aaKnown RBP15.3■□□□□ 0.04
COL27A1-201ENST00000356083 PERPQ96FX8 193 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 RASL12Q9NYN1 266 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 UPK1AO00322 258 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 BAP18Q8IXM2 172 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 PP6455Q8WZ26 134 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 SOSTQ9BQB4 213 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 PAM16Q9Y3D7 125 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 TOMM34Q15785 309 aaPredicted RBP15.3■□□□□ 0.04
COL27A1-201ENST00000356083 TSPO2Q5TGU0 170 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 SOX21Q9Y651 276 aaPredicted RBP15.3■□□□□ 0.04
COL27A1-201ENST00000356083 GVINP1Q7Z2Y8 2422 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 ACACAQ13085 2346 aa15.3■□□□□ 0.04
COL27A1-201ENST00000356083 HINT1P49773 126 aaPredicted RBP15.29■□□□□ 0.04
COL27A1-201ENST00000356083 NUBP1P53384 320 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 TCEAL1Q15170 157 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 CTU2Q2VPK5 515 aaKnown RBP15.29■□□□□ 0.04
COL27A1-201ENST00000356083 TMEM251Q8N6I4 163 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 TEX29Q8N6K0 151 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 NAT8Q9UHE5 227 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 SLC25A35Q3KQZ1 300 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 FAM74A4Q5TZK3 123 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 OTUD1Q5VV17 481 aaPredicted RBP15.29■□□□□ 0.04
COL27A1-201ENST00000356083 ZNF880Q6PDB4 577 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 MVB12AQ96EY5 273 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 IGHV3-72A0A0B4J1Y9 119 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 PPM1DO15297 605 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 ELOBQ15370 118 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 DUX5Q96PT3 197 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 SLC25A33Q9BSK2 321 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 IGSF23A1L1A6 192 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 MAGEA5P43359 124 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 FAM24BQ8N5W8 94 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 LYRM2Q9NU23 88 aaPredicted RBP15.29■□□□□ 0.04
COL27A1-201ENST00000356083 PHLDA3Q9Y5J5 127 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 NEURL4Q96JN8 1562 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 KRTCAP3Q53RY4 240 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 SYT8Q8NBV8 401 aa15.29■□□□□ 0.04
COL27A1-201ENST00000356083 CTSLP07711 333 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 C9orf50Q5SZB4 431 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 NPIPB6E9PJ23 425 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 NHLRC1Q6VVB1 395 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 PAQR9Q6ZVX9 377 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 A0A1W2PPE3 182 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 DNAL4O96015 105 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 PTHLHP12272 177 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 SPAARA0A1B0GVQ0 90 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 ADRA2AP08913 450 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 GBGT1Q8N5D6 347 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 SFRP2Q96HF1 295 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 SLC17A2O00624 439 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 FAM157CP0CG43 387 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms