RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RBM38Q9H0Z9 239 aaKnown RBP12.85□□□□□ -0.35
TRIM13-201ENST00000356017 INSIG2Q9Y5U4 225 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 MALRD1Q5VYJ5 2156 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 CELSR1Q9NYQ6 3014 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 A0A1W2PQ09 198 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 hADV38S2A0JD32 116 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 A8MV72 311 aaPredicted RBP12.84□□□□□ -0.35
TRIM13-201ENST00000356017 CA11O75493 328 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
TRIM13-201ENST00000356017 VEGFCP49767 419 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 ATXN7L3Q14CW9 347 aaPredicted RBP12.84□□□□□ -0.35
TRIM13-201ENST00000356017 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 SIGIRRQ6IA17 410 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 OR4M1Q8NGD0 313 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 PHF21AQ96BD5 680 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 NCOR1P1Q9H4R4 102 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 PLEKHJ1Q9NW61 149 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 ZNF581Q9P0T4 197 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 HSF4Q9ULV5 492 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 VGLL3A8MV65 326 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 CHATP28329 748 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 EFNB2P52799 333 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 AESQ08117 197 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 NKAPLQ5M9Q1 402 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 Q6ZTK2 550 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 FAM185AQ8N0U4 392 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 ATG5Q9H1Y0 275 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 YAE1D1Q9NRH1 226 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 C19orf12Q9NSK7 152 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 RHBDL2Q9NX52 303 aa12.84□□□□□ -0.35
TRIM13-201ENST00000356017 YLPM1P49750 1951 aaKnown RBP12.84□□□□□ -0.35
TRIM13-201ENST00000356017 SOCS1O15524 211 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 PAX8Q06710 450 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 ARL6IP1Q15041 203 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 TMEM200BQ69YZ2 307 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 MZT2AQ6P582 158 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 BRICD5Q6PL45 260 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 METAP1DQ6UB28 335 aaPredicted RBP12.83□□□□□ -0.36
TRIM13-201ENST00000356017 CMTM4Q8IZR5 234 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 KIR3DL3Q8N743 410 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 ZNF565Q8N9K5 539 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 OR10R2Q8NGX6 335 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 DGCR14Q96DF8 476 aaKnown RBP12.83□□□□□ -0.36
TRIM13-201ENST00000356017 C7orf69Q9H7B7 122 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 TMEM160Q9NX00 188 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 OR6C3Q9NZP0 311 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 KPTNQ9Y664 436 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 LINC00312Q9Y6C7 94 aa12.83□□□□□ -0.36
TRIM13-201ENST00000356017 MED13LQ71F56 2210 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 A0A0A6YYD4 124 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 hCG_1809904A0A1W2PP81 198 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 A0A1W2PPE2 198 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 A0A1W2PR64 198 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 A0A1W2PRV1 198 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 TMEM30CPA0ZSE6 113 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 ODAMA1E959 279 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 GLIPR1P48060 266 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 METTL11BQ5VVY1 283 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 RSBN1Q5VWQ0 802 aaPredicted RBP12.82□□□□□ -0.36
TRIM13-201ENST00000356017 SLC35E4Q6ICL7 350 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 C1orf122Q6ZSJ8 110 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 C6orf201Q7Z4U5 140 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 TEX29Q8N6K0 151 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 TPRX1Q8N7U7 411 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 OR5H6Q8NGV6 325 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 DYNC2LI1Q8TCX1 351 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 RAB3CQ96E17 227 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 COQ2Q96H96 371 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 CMTM3Q96MX0 182 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 ING3Q9NXR8 418 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 ETAA1Q9NY74 926 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 AUP1Q9Y679 476 aa12.82□□□□□ -0.36
TRIM13-201ENST00000356017 MEIKINA0A087WXM9 373 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 TRGV10A0A0A0MS01 117 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 A0A0A6YYH2 397 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 A6NJ64 397 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 FOXI3A8MTJ6 420 aaPredicted RBP12.81□□□□□ -0.36
TRIM13-201ENST00000356017 M0R1W7 72 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 RAB27BO00194 218 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 UBE2NLQ5JXB2 153 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 SAMD12Q8N8I0 201 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 PLPPR1Q8TBJ4 325 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 FAAP24Q9BTP7 215 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 ABCG5Q9H222 651 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 GSX1Q9H4S2 264 aaPredicted RBP12.81□□□□□ -0.36
TRIM13-201ENST00000356017 CCDC59Q9P031 241 aaKnown RBP12.81□□□□□ -0.36
TRIM13-201ENST00000356017 ONECUT1Q9UBC0 465 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 KIF25Q9UIL4 384 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 UBE2J1Q9Y385 318 aaPredicted RBP12.81□□□□□ -0.36
TRIM13-201ENST00000356017 HIVEP1P15822 2718 aa12.81□□□□□ -0.36
TRIM13-201ENST00000356017 UBE2QL1A1L167 161 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 ABCA1O95477 2261 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 TMEM50BP56557 158 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 ARF6P62330 175 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 CR1LQ2VPA4 569 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 ZNF497Q6ZNH5 498 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 TRAPPC6BQ86SZ2 158 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 CORO2AQ92828 525 aa12.8□□□□□ -0.36
TRIM13-201ENST00000356017 S100A16Q96FQ6 103 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms