RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SIGLEC14Q08ET2 396 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZIC1Q15915 447 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 C6orf15Q6UXA7 325 aaPredicted RBP11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 FAM181AQ8N9Y4 354 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 AQP10Q96PS8 301 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 TXNDC17Q9BRA2 123 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 EFNB2P52799 333 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZXDAP98168 799 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 CD200R1LQ6Q8B3 271 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZNF683Q8IZ20 524 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 C5orf17Q8NAS9 161 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 SPOCK3Q9BQ16 436 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 DDX60LQ5H9U9 1706 aaKnown RBP11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 MPZL1O95297 269 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR4S2Q8NH73 311 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 SPPL3Q8TCT6 385 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 TMEM50BP56557 158 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 RPS4XP62701 263 aaKnown RBP11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 UBALD1Q8TB05 177 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 MISP3Q96FF7 219 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 IP6K3Q96PC2 410 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 GPR61Q9BZJ8 451 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZNF774Q6NX45 483 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR6X1Q8NH79 312 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 RSG1Q9BU20 258 aa11.21□□□□□ -0.61
SYNCRIP-201ENST00000355238 A0A0B4J293 547 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 ORM1P02763 201 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 SPINK9Q5DT21 86 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZNF600Q6ZNG1 722 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 BHLHA9Q7RTU4 235 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR4A4PQ8NGN8 299 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR10AC1Q8NH08 325 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 GSN-AS1Q9NRJ2 163 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 FLRT3Q9NZU0 649 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 KCNE5Q9UJ90 142 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZNF32P17041 273 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 SRSF9Q13242 221 aaKnown RBP eCLIP11.21□□□□□ -0.622e-6■■□□□ 12.5
SYNCRIP-201ENST00000355238 DOLPP1Q86YN1 238 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 R3HDM4Q96D70 268 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 R3HDMLQ9H3Y0 253 aa11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 SEBOXQ9HB31 216 aaPredicted RBP11.21□□□□□ -0.62
SYNCRIP-201ENST00000355238 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 COL8A1P27658 744 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 ATG4DQ86TL0 474 aaPredicted RBP11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 LINC01555Q8NAE3 123 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 TUBD1Q9UJT1 453 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 MMP17Q9ULZ9 603 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 HBZP02008 142 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 LSM6P62312 80 aaKnown RBP11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 LPAL2Q16609 132 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 FAM219AQ8IW50 185 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 PIPOXQ9P0Z9 390 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 MDKP21741 143 aaPredicted RBP11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 SPATA46Q5T0L3 261 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 LIMS2Q7Z4I7 341 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZBTB34Q8NCN2 500 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 AP5S1Q9NUS5 200 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 MPC1Q9Y5U8 109 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 LYG1Q8N1E2 194 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 SARAFQ96BY9 339 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 SIRT4Q9Y6E7 314 aaPredicted RBP11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 RECKO95980 971 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 PTPMT1Q8WUK0 201 aaPredicted RBP11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 ABHD14BQ96IU4 210 aa11.2□□□□□ -0.62
SYNCRIP-201ENST00000355238 SLC22A20A6NK97 555 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 STXBP6Q8NFX7 210 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR1L1Q8NH94 360 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 DEFB127Q9H1M4 99 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 SAP30LQ9HAJ7 183 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 TMEM38BQ9NVV0 291 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 TGIF2-C20orf24A0A0A6YYL0 155 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 H3BVH4 76 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 GFERP55789 205 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 TCTAP57738 103 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR8A1Q8NGG7 326 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 PERPQ96FX8 193 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 CCL28Q9NRJ3 127 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 CBLN4Q9NTU7 201 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 P4HTMQ9NXG6 502 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZADH2Q8N4Q0 377 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 PCGF1Q9BSM1 259 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 IL36GQ9NZH8 169 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 ATP23Q9Y6H3 246 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 M0R1B8 84 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 AESQ08117 197 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 TEX30Q5JUR7 227 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 SSC5DA1L4H1 1573 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 DEFB108AA8MXU0 73 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 SHISA8B8ZZ34 492 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 PRF1P14222 555 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 FSTP19883 344 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 CA6P23280 308 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 G6PCP35575 357 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZNF547Q8IVP9 402 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 LRRC75AQ8NAA5 344 aa11.19□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR2M3Q8NG83 312 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms