RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PAIP2BQ9ULR5 123 aaKnown RBP14.52□□□□□ -0.09
VPS13B-201ENST00000355155 ATP6V1G2-DDX39BF2Z307 99 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 FGL1Q08830 312 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 HERPUD1Q15011 391 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 TRBV6-7A0A0A0MS04 114 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 RFPL4AA6NLU0 287 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 RFPL4AL1F8VTS6 287 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 GRPP07492 148 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 LGALSLQ3ZCW2 172 aaPredicted RBP14.51□□□□□ -0.09
VPS13B-201ENST00000355155 COQ8AQ8NI60 647 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 MRPL37Q9BZE1 423 aaKnown RBP14.51□□□□□ -0.09
VPS13B-201ENST00000355155 NMES1Q9C002 83 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 PLSCR3Q9NRY6 295 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 IL19Q9UHD0 177 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 GLRA1P23415 457 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 SORDQ00796 357 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 MSL2Q9HCI7 577 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 ITGB1BP2Q9UKP3 347 aa14.51□□□□□ -0.09
VPS13B-201ENST00000355155 URB1O60287 2271 aaKnown RBP14.5□□□□□ -0.09
VPS13B-201ENST00000355155 IGKV1-6A0A0C4DH72 117 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 ZNF728P0DKX0 622 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 CHRNB4P30926 498 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 FCGR2CP31995 323 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 SMIM21Q3B7S5 101 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 C11orf88Q6PI97 169 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 C20orf204Q6ZNR8 217 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 NCCRP1Q6ZVX7 275 aaPredicted RBP14.5□□□□□ -0.09
VPS13B-201ENST00000355155 ASCC1Q8N9N2 400 aaKnown RBP14.5□□□□□ -0.09
VPS13B-201ENST00000355155 PLPPR1Q8TBJ4 325 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 TMEM246Q9BRR3 403 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 CHMP1AQ9HD42 196 aaPredicted RBP14.5□□□□□ -0.09
VPS13B-201ENST00000355155 NGBQ9NPG2 151 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 PTPRQQ9UMZ3 2332 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 SHANK1Q9Y566 2161 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 PPYP01298 95 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 AKR1C4P17516 323 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 IL15RAQ13261 267 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 CR1LQ2VPA4 569 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 PRAMEF6Q5VXH4 476 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 KCTD9Q7L273 389 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 FAM216AQ8WUB2 273 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 RNASE6Q93091 150 aaKnown RBP14.5□□□□□ -0.09
VPS13B-201ENST00000355155 FZR1Q9UM11 496 aa14.5□□□□□ -0.09
VPS13B-201ENST00000355155 ANKRD11Q6UB99 2663 aaPredicted RBP14.49□□□□□ -0.09
VPS13B-201ENST00000355155 PTPRZ1P23471 2315 aaPredicted RBP14.49□□□□□ -0.09
VPS13B-201ENST00000355155 TRAV14DV4A0A0A6YYC5 116 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 FAM221AA4D161 298 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.49□□□□□ -0.09
VPS13B-201ENST00000355155 ERVH48-1M5A8F1 160 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 LYL1P12980 280 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 SELENOVP59797 346 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 PAN3Q58A45 887 aaKnown RBP14.49□□□□□ -0.09
VPS13B-201ENST00000355155 NCMAPQ5T1S8 102 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 H1FOOQ8IZA3 346 aaPredicted RBP14.49□□□□□ -0.09
VPS13B-201ENST00000355155 BATF2Q8N1L9 274 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 HEXA-AS1Q9H8Q6 139 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 CELSR3Q9NYQ7 3312 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 PGAM2P15259 253 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 AADACP22760 399 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 DUSP1P28562 367 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 MSMO1Q15800 293 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 LIN54Q6MZP7 749 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 SUCNR1Q9BXA5 334 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 NAA60Q9H7X0 242 aa14.49□□□□□ -0.09
VPS13B-201ENST00000355155 IFNA2P01563 188 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 SCTP09683 121 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 ZNF44P15621 663 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 CYCSP99999 105 aaKnown RBP14.48□□□□□ -0.09
VPS13B-201ENST00000355155 ANKRD55Q3KP44 614 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 WDR89Q96FK6 387 aaPredicted RBP14.48□□□□□ -0.09
VPS13B-201ENST00000355155 VRK1Q99986 396 aaPredicted RBP14.48□□□□□ -0.09
VPS13B-201ENST00000355155 TAAR3PQ9P1P4 343 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 TK1P04183 234 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 RPA2P15927 270 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 IGSF11Q5DX21 431 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 OR2Z1Q8NG97 314 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 LILRB4Q8NHJ6 448 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 C1orf123Q9NWV4 160 aa14.48□□□□□ -0.09
VPS13B-201ENST00000355155 HS3ST1O14792 307 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 B3GALNT1O75752 331 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 ZNF826PQ6ZT77 177 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 SGPP2Q8IWX5 399 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 CCDC71LQ8N9Z2 235 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 RDH5Q92781 318 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 ELMOD3Q96FG2 381 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 WFIKKN1Q96NZ8 548 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 BOLA1Q9Y3E2 137 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 TRGV8A0A0C4DH27 118 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 TMEM30CPA0ZSE6 113 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 SIX6O95475 246 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 IGHV1-46P01743 117 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 C4BPBP20851 252 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 TMEM187Q14656 261 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 HSPB11Q9Y547 144 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 OR3A1P47881 315 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 ADORA2A-AS1P86434 159 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 BSPH1Q075Z2 132 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 BAMBIQ13145 260 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 ADIPOQQ15848 244 aa14.47□□□□□ -0.09
VPS13B-201ENST00000355155 NDUFA5Q16718 116 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms