RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CACNA1DQ01668 2161 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 CDX4O14627 284 aaPredicted RBP5.16□□□□□ -1.58
CLCN3-201ENST00000347613 SS18L1O75177 396 aaPredicted RBP5.16□□□□□ -1.58
CLCN3-201ENST00000347613 OMGP23515 440 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 CBX5P45973 191 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 CYB561P49447 251 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 PRDX4Q13162 271 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 HAGHQ16775 308 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 SGPP2Q8IWX5 399 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 MOB3AQ96BX8 217 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 RSRP1Q9BUV0 290 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 ARV1Q9H2C2 271 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 CCL28Q9NRJ3 127 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 C14orf166Q9Y224 244 aaKnown RBP5.16□□□□□ -1.58
CLCN3-201ENST00000347613 ZNF724A8MTY0 619 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 CDRT15L2A8MXV6 281 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 H7C1Q1 480 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 HS3ST1O14792 307 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 IL18BPO95998 194 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 PPYP01298 95 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 PAX9P55771 341 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 MIDNQ504T8 468 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 LIAT1Q6ZQX7 453 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 RAB11FIP2Q7L804 512 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 TBC1D26Q86UD7 250 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 GAPTQ8N292 157 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 HSD17B11Q8NBQ5 300 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 SPSB1Q96BD6 273 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 TTTY12Q9BZ98 90 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 PLSCR4Q9NRQ2 329 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 NECAP2Q9NVZ3 263 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 PIEZO2Q9H5I5 2752 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 TRAV24A0A0B4J272 114 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 SLC22A20A6NK97 555 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 PCP4L1A6NKN8 68 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 HSD17B6O14756 317 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 LAMTOR5O43504 91 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 NAPSAO96009 420 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 IGKV1-39P01597 117 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 IGKV1D-39P04432 117 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 ACP1P24666 158 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 FKBP2P26885 142 aaKnown RBP5.15□□□□□ -1.58
CLCN3-201ENST00000347613 CYCSP99999 105 aaKnown RBP5.15□□□□□ -1.58
CLCN3-201ENST00000347613 RUNX1Q01196 453 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 PMP22Q01453 160 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 SURF2Q15527 256 aaPredicted RBP5.15□□□□□ -1.58
CLCN3-201ENST00000347613 DCAF12Q5T6F0 453 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 C6orf15Q6UXA7 325 aaPredicted RBP5.15□□□□□ -1.58
CLCN3-201ENST00000347613 TMPRSS7Q7RTY8 843 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 LINC00518Q8N0U6 118 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 TMEM251Q8N6I4 163 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 OR5T2Q8NGG2 359 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 GALNT14Q96FL9 552 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 SGCZQ96LD1 299 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 OR1A1Q9P1Q5 309 aa5.15□□□□□ -1.58
CLCN3-201ENST00000347613 USF3Q68DE3 2245 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 KIAA1324LA8MWY0 1029 aaPredicted RBP5.15□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF732B4DXR9 585 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 PDCD6O75340 191 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 CA11O75493 328 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 SNAPC5O75971 98 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 CST4P01036 141 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 SNCAP37840 140 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 CEBPDP49716 269 aaPredicted RBP5.15□□□□□ -1.59
CLCN3-201ENST00000347613 FUT6P51993 359 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 CLINT1Q14677 625 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 SP5Q6BEB4 398 aaPredicted RBP5.15□□□□□ -1.59
CLCN3-201ENST00000347613 UQCC3Q6UW78 93 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 SSX7Q7RTT5 188 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 Q8NFD4 153 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 EXTL1Q92935 676 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 ARL11Q969Q4 196 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 POM121L2Q96KW2 1035 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 AIFM2Q9BRQ8 373 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 SEC11CQ9BY50 192 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF442Q9H7R0 627 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 PCDHB16Q9NRJ7 776 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 TAAR3PQ9P1P4 343 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 DNAJB11Q9UBS4 358 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 GLS2Q9UI32 602 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 SVILO95425 2214 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 PTPRBP23467 1997 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 C3orf85A0A1B0GTC6 90 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 H0YL77 283 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 MPPED1O15442 326 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 IL32P24001 234 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 RPL35P42766 123 aaKnown RBP5.15□□□□□ -1.59
CLCN3-201ENST00000347613 HABP2Q14520 560 aaPredicted RBP5.15□□□□□ -1.59
CLCN3-201ENST00000347613 SELENOHQ8IZQ5 122 aaKnown RBP5.15□□□□□ -1.59
CLCN3-201ENST00000347613 RDH5Q92781 318 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 C10orf35Q96D05 121 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 KIRREL1Q96J84 757 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 DEFB127Q9H1M4 99 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 Q9N2K0 584 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 SPRR3Q9UBC9 169 aa5.15□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF816-ZNF321PA0A0X1KG74 233 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 MRPL33O75394 65 aaKnown RBP5.14□□□□□ -1.59
CLCN3-201ENST00000347613 CST7O76096 145 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 ARG1P05089 322 aa5.14□□□□□ -1.59
CLCN3-201ENST00000347613 SERPINA7P05543 415 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms