RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 DUX4L6P0CJ89 424 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 DUX4L7P0CJ90 424 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 PTHLHP12272 177 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 SMIM21Q3B7S5 101 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 ATAD3CQ5T2N8 411 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 DUX4L9Q6RFH8 374 aaPredicted RBP11.43□□□□□ -0.58
TPM4-202ENST00000344824 MFSD4AQ8N468 514 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 BPIFB2Q8N4F0 458 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 OR10R2Q8NGX6 335 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 S100ZQ8WXG8 99 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 TMEM158Q8WZ71 300 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 GCDHQ92947 438 aaPredicted RBP11.43□□□□□ -0.58
TPM4-202ENST00000344824 MRPS24Q96EL2 167 aaKnown RBP11.43□□□□□ -0.58
TPM4-202ENST00000344824 CCL13Q99616 98 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 HES4Q9HCC6 221 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 DUX4Q9UBX2 424 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 OPN4Q9UHM6 478 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 V9GYH0 126 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 TRAV40A0A0B4J280 105 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 PPIAL4CA0A0B4J2A2 164 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 NKX6-3A6NJ46 265 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.43□□□□□ -0.58
TPM4-202ENST00000344824 J3QRK9 145 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 RAB27BO00194 218 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 SIRPB1O00241 398 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 XRCC3O43542 346 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 FSTL3O95633 263 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 ACAA1P09110 424 aaPredicted RBP11.43□□□□□ -0.58
TPM4-202ENST00000344824 ZNF44P15621 663 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 GNB3P16520 340 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 CFHR2P36980 270 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 GABRA2P47869 451 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 ZNF846Q147U1 533 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 FAM189A2Q15884 450 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 PYDC2Q56P42 97 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 TEX36Q5VZQ5 186 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 BRICD5Q6PL45 260 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 Q8NFD4 153 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 ZNF418Q8TF45 676 aaPredicted RBP11.43□□□□□ -0.58
TPM4-202ENST00000344824 RAB3CQ96E17 227 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 ARHGAP5-AS1Q96IT6 56 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 NEDD4LQ96PU5 975 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 SLC6A7Q99884 636 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 RHOFQ9HBH0 211 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 RASL12Q9NYN1 266 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 NLKQ9UBE8 527 aa11.43□□□□□ -0.58
TPM4-202ENST00000344824 POLR3KQ9Y2Y1 108 aaPredicted RBP11.43□□□□□ -0.58
TPM4-202ENST00000344824 RFPL4AA6NLU0 287 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 C22orf46C9J442 243 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 RFPL4AL1F8VTS6 287 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 DVL1O14640 695 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 DEGS1O15121 323 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 NDUFA2O43678 99 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 ENSAO43768 121 aaKnown RBP11.42□□□□□ -0.58
TPM4-202ENST00000344824 SCGNO76038 276 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 HAND1O96004 215 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 LHBP01229 141 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 CHRM2P08172 466 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 MUC1P15941 1255 aaPredicted RBP11.42□□□□□ -0.58
TPM4-202ENST00000344824 NPY4RP50391 375 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 TMEM50BP56557 158 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 IL13RA2Q14627 380 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 KRTAP24-1Q3LI83 254 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 CDNFQ49AH0 187 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 NHLRC3Q5JS37 347 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 OLFML2AQ68BL7 652 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 SIGIRRQ6IA17 410 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 RAB12Q6IQ22 244 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 LINC00299Q6ZSB3 139 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 Q6ZTK2 550 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 C6orf201Q7Z4U5 140 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 FAM89BQ8N5H3 189 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 WDR12Q9GZL7 423 aaKnown RBP11.42□□□□□ -0.58
TPM4-202ENST00000344824 PLEKHJ1Q9NW61 149 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 GLS2Q9UI32 602 aa11.42□□□□□ -0.58
TPM4-202ENST00000344824 ELF5Q9UKW6 265 aaPredicted RBP11.42□□□□□ -0.58
TPM4-202ENST00000344824 UBE2QL1A1L167 161 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 TMEM235A6NFC5 223 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 OR2AT4A6NND4 320 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 SH2D1BO14796 132 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 OR2H2O95918 312 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 KNG1P01042 644 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 PSG2P11465 335 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 ETV6P41212 452 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 MNDAP41218 407 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 ZNF45Q02386 682 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 ZNF79Q15937 498 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 PLAC9Q5JTB6 97 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 PYHIN1Q6K0P9 492 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 BAIAP2L2Q6UXY1 529 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 SLC36A1Q7Z2H8 476 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 FGFRL1Q8N441 504 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 NEK7Q8TDX7 302 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 DYRK2Q92630 601 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 ABHD1Q96SE0 405 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 PCGF1Q9BSM1 259 aa11.41□□□□□ -0.58
TPM4-202ENST00000344824 PECRQ9BY49 303 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms