RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ZNF880Q6PDB4 577 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 FIP1L1Q6UN15 594 aaKnown RBP16.9■□□□□ 0.3
RTN1-202ENST00000342503 WDR82Q6UXN9 313 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 TMEM171Q8WVE6 324 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 ELMOD3Q96FG2 381 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 USB1Q9BQ65 265 aaKnown RBP16.9■□□□□ 0.3
RTN1-202ENST00000342503 SYT3Q9BQG1 590 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 CHD3Q12873 2000 aaKnown RBP16.9■□□□□ 0.3
RTN1-202ENST00000342503 CRYM-AS1A6NIL9 109 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 RFPL4AA6NLU0 287 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 HMSDA8MTL9 139 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 RFPL4AL1F8VTS6 287 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 SERPINF1P36955 418 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 MDH2P40926 338 aaKnown RBP16.9■□□□□ 0.3
RTN1-202ENST00000342503 KLF3P57682 345 aaPredicted RBP16.9■□□□□ 0.3
RTN1-202ENST00000342503 HERV-K104P61576 105 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 HOXA4Q00056 320 aaPredicted RBP16.9■□□□□ 0.3
RTN1-202ENST00000342503 PLPPR1Q8TBJ4 325 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 RND1Q92730 232 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 DMRTA2Q96SC8 542 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 HEXA-AS1Q9H8Q6 139 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 TMEM165Q9HC07 324 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 OR14J1Q9UGF5 321 aa16.9■□□□□ 0.3
RTN1-202ENST00000342503 C5orf51A6NDU8 294 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 BET1O15155 118 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 HAND1O96004 215 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 PPYP01298 95 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 IFNA2P01563 188 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 CD200P41217 278 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 CEBPDP49716 269 aaPredicted RBP16.89■□□□□ 0.29
RTN1-202ENST00000342503 UCP3P55916 312 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 PIGPP57054 158 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 HERPUD1Q15011 391 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 GSG1LQ6UXU4 331 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 WFDC8Q8IUA0 241 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 SGPP2Q8IWX5 399 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 OR5T2Q8NGG2 359 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 VKORC1Q9BQB6 163 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 C1orf123Q9NWV4 160 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 SPTBN4Q9H254 2564 aa16.89■□□□□ 0.29
RTN1-202ENST00000342503 TRGV8A0A0C4DH27 118 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 IGKV1-6A0A0C4DH72 117 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 TEX13DA0A0J9YY54 714 aaPredicted RBP16.88■□□□□ 0.29
RTN1-202ENST00000342503 C13orf42A0A1B0GVH6 325 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 ZSCAN5BA6NJL1 495 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 L7N2F9 121 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 ARPC5O15511 151 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 RPS23P62266 143 aaKnown RBP16.88■□□□□ 0.29
RTN1-202ENST00000342503 FGL1Q08830 312 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 ABCA11PQ4W5N1 156 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 SHEQ5VZ18 495 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 ACP7Q6ZNF0 438 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 SLC38A6Q8IZM9 456 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 PIK3IP1Q96FE7 263 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 RSRP1Q9BUV0 290 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 RAB18Q9NP72 206 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 TREM2Q9NZC2 230 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 COMMD9Q9P000 198 aa16.88■□□□□ 0.29
RTN1-202ENST00000342503 IGLV3-9A0A075B6K5 115 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 hCG_1807616A0A1W2PRN6 198 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 ADAP1O75689 374 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 SNAPC5O75971 98 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 THBDP07204 575 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 RCC1P18754 421 aaPredicted RBP16.87■□□□□ 0.29
RTN1-202ENST00000342503 HLA-DRB3P79483 266 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 ZNF497Q6ZNH5 498 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 SLC7A5P1Q8MH63 180 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 RASL12Q9NYN1 266 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 MEMO1Q9Y316 297 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 IGF2RP11717 2491 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 DIRAS3O95661 229 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 TK1P04183 234 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 CTXN2P0C2S0 81 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 RBMXP38159 391 aaKnown RBP16.87■□□□□ 0.29
RTN1-202ENST00000342503 OPCMLQ14982 345 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 PHLDA2Q53GA4 152 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 OR8H1Q8NGG4 311 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 MRPL37Q9BZE1 423 aaKnown RBP16.87■□□□□ 0.29
RTN1-202ENST00000342503 NAA60Q9H7X0 242 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 RDH8Q9NYR8 311 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 TAAR3PQ9P1P4 343 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 GLS2Q9UI32 602 aa16.87■□□□□ 0.29
RTN1-202ENST00000342503 MPC2O95563 127 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 ID4P47928 161 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 ATXN7L3Q14CW9 347 aaPredicted RBP16.86■□□□□ 0.29
RTN1-202ENST00000342503 NDUFA5Q16718 116 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 LRRC37A5PQ49AS3 106 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 TMEM108Q6UXF1 575 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 ZNF767PQ75MW2 155 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 OR4A4PQ8NGN8 299 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 LRRC29Q8WV35 223 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 PPP1R1CQ8WVI7 109 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 SLC2A9Q9NRM0 540 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 SHANK1Q9Y566 2161 aa16.86■□□□□ 0.29
RTN1-202ENST00000342503 RP1L1Q8IWN7 2480 aaPredicted RBP16.85■□□□□ 0.29
RTN1-202ENST00000342503 TRAV39A0A0B4J263 110 aa16.85■□□□□ 0.29
RTN1-202ENST00000342503 H7C1Q1 480 aa16.85■□□□□ 0.29
RTN1-202ENST00000342503 PTBP3O95758 552 aaKnown RBP16.85■□□□□ 0.29
RTN1-202ENST00000342503 PTAFRP25105 342 aa16.85■□□□□ 0.29
RTN1-202ENST00000342503 SPRNQ5BIV9 151 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms