RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 A0A0U1RQK1 487 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 SHISA3A0PJX4 238 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 ODAMA1E959 279 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 NPFFO15130 113 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 SLC22A1O15245 554 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 RBP4P02753 201 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 UBBP0CG47 229 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 UBE2E1P51965 193 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 ATAD3CQ5T2N8 411 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 SYT6Q5T7P8 510 aaPredicted RBP12.45□□□□□ -0.42
UBE3B-201ENST00000340074 C22orf42Q6IC83 251 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 OR10K2Q6IF99 312 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 BRICD5Q6PL45 260 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 ZDHHC22Q8N966 263 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 TSPAN14Q8NG11 270 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 OR6M1Q8NGM8 313 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 TMEM158Q8WZ71 300 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 CORO2AQ92828 525 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 SLC25A28Q96A46 364 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 DUX5Q96PT3 197 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 BARHL1Q9BZE3 327 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 CST11Q9H112 138 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 KCNK15Q9H427 330 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 PLGRKTQ9HBL7 147 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 TRAV1-2A0A0B4J238 106 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 DNAJC9-AS1A6NH13 148 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 RNF212BA8MTL3 300 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 IGHV1-8P0DP01 117 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 VSIG8P0DPA2 414 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 COX7A1P24310 79 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 MYL9P24844 172 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 KCNJ3P48549 501 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 BAMBIQ13145 260 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 Q96M66 194 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 HEXA-AS1Q9H8Q6 139 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 KIF25Q9UIL4 384 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 STUB1Q9UNE7 303 aa12.45□□□□□ -0.42
UBE3B-201ENST00000340074 A0A087WXM4 84 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 MEIOCA2RUB1 952 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 SLC17A2O00624 439 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 CLPXO76031 633 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 MPIG6BO95866 241 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 FGF9P31371 208 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-201ENST00000340074 SAA4P35542 130 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 OR10A3P58181 314 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 PAX5Q02548 391 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 UNC119Q13432 240 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 P2RY14Q15391 338 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 RSBN1Q5VWQ0 802 aaPredicted RBP12.44□□□□□ -0.42
UBE3B-201ENST00000340074 NEK7Q8TDX7 302 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 OR51E2Q9H255 320 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 PRDM13Q9H4Q3 707 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 ZNF696Q9H7X3 374 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 TXNL4BQ9NX01 149 aaKnown RBP12.44□□□□□ -0.42
UBE3B-201ENST00000340074 TAS2R3Q9NYW6 316 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 OR6C3Q9NZP0 311 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 RCC2Q9P258 522 aaKnown RBP12.44□□□□□ -0.42
UBE3B-201ENST00000340074 V9GY05 133 aa12.44□□□□□ -0.42
UBE3B-201ENST00000340074 MEIKINA0A087WXM9 373 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A10PA6NDY2 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A18PA6NE21 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A16PA6NEW6 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A20PA6NIJ5 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A8PA6NJQ4 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A7PA6NKC0 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A22PA8MWA6 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 TMEM14DPA8MWL7 114 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A12PA8MX19 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A5PA8MXJ8 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A23PA8MXZ1 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 TRIM77I1YAP6 450 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 MMP23AO75900 390 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 BPNT1O95861 308 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A15PP0C7V4 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A13PP0C7W8 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A14PP0C7W9 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM90A24PP0C7X0 464 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 ARSBP15848 533 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 PSMD7P51665 324 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 CLDN12P56749 244 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 UBA52P62987 128 aaKnown RBP12.43□□□□□ -0.42
UBE3B-201ENST00000340074 QRFPP83859 136 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 RAB11BQ15907 218 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 SIGIRRQ6IA17 410 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 SLC35E4Q6ICL7 350 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 RAB12Q6IQ22 244 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 Q6YL49 198 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 OR13A1Q8NGR1 328 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 KCNG3Q8TAE7 436 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 GAL3ST2Q9H3Q3 398 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 SPACA1Q9HBV2 294 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 SSR3Q9UNL2 185 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 FAM96BQ9Y3D0 163 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 PEX16Q9Y5Y5 336 aa12.43□□□□□ -0.42
UBE3B-201ENST00000340074 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 PDCD5O14737 125 aa12.42□□□□□ -0.42
UBE3B-201ENST00000340074 HOXA3O43365 443 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms