RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 FREM1Q5H8C1 2179 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 AHRRA9YTQ3 701 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CCSO14618 274 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZGLP1P0C6A0 271 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ATXN1LP0C7T5 689 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SLC25A4P12235 298 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 FUT1P19526 365 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GIFP27352 417 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TSPOP30536 169 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CLEC18BQ6UXF7 455 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ISCA2Q86U28 154 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 DMBX1Q8NFW5 382 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR2T10Q8NGZ9 312 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 INPP5KQ9BT40 448 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TECRQ9NZ01 308 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TIMM22Q9Y584 194 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZC3H12DA2A288 527 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 S100A4P26447 101 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 AKR1C3P42330 323 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 DIO1P49895 249 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SRSF2Q01130 221 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ID2Q02363 134 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 EXOSC2Q13868 293 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 C20orf204Q6ZNR8 217 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 Q6ZS52 159 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PRSS42Q7Z5A4 293 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SELENOHQ8IZQ5 122 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 METTL17Q9H7H0 456 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 DNAJC27Q9NZQ0 273 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 MTFP1Q9UDX5 166 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PRNDQ9UKY0 176 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 CHST2Q9Y4C5 530 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 A0A1W2PQM1 296 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PROB1E7EW31 1015 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 RNF4P78317 190 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SMN1Q16637 294 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 IMMP2LQ96T52 175 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 C12orf57Q99622 126 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 DERL1Q9BUN8 251 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 FLRT3Q9NZU0 649 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 DHCR7Q9UBM7 475 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 FLVCR1Q9Y5Y0 555 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 F8P00451 2351 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 COL4A3Q01955 1670 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 OR2J2O76002 312 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 LGALS7P47929 136 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SOX8P57073 446 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 GNG3P63215 75 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 TNFRSF17Q02223 184 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 DCAF12L2Q5VW00 463 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 FAM156AQ8NDB6 213 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 OR4C13Q8NGP0 309 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PELI1Q96FA3 418 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 DOK1Q99704 481 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 TGIF2Q9GZN2 237 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 CHST5Q9GZS9 411 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 MAGT1Q9H0U3 335 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 GPR132Q9UNW8 380 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF724A8MTY0 619 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 C11orf98E9PRG8 122 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ARPC1BO15143 372 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PLPP2O43688 288 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 NDUFB6O95139 128 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SCGB1A1P11684 91 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ADRA1AP35348 466 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PPP1R8Q12972 351 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 RAB32Q13637 225 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 RRN3P1Q2M238 152 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 TP53I3Q53FA7 332 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SP5Q6BEB4 398 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 DESI1Q6ICB0 168 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 MAMSTRQ6ZN01 415 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ACOT4Q8N9L9 421 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 CHST14Q8NCH0 376 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ADAT3Q96EY9 351 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PTPN13Q12923 2485 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 LOC730098B7Z3J9 87 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ALDOCP09972 364 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF888P0CJ79 500 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 FUT3P21217 361 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 GLRA1P23415 457 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 MMP11P24347 488 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SOX3P41225 446 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PPICP45877 212 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 GNG4P50150 75 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM33P57088 247 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ACVR1Q04771 509 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 FUT7Q11130 342 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 CDK5R1Q15078 307 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SAPCD1Q5SSQ6 148 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 SFRP5Q5T4F7 317 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 BPIFA4PQ86YQ2 179 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 CYB561A3Q8NBI2 242 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 OR5A1Q8NGJ0 315 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 HMGCLL1Q8TB92 370 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 CT55Q8WUE5 264 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 EDA2RQ9HAV5 297 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 BLVRBP30043 206 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 P2RY1P47900 373 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 GUCA2AQ02747 115 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms