RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ZNF732B4DXR9 585 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 LINC01387J3KSC0 135 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 NRN1LQ496H8 165 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 FBXW12Q6X9E4 464 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 NUFIP2Q7Z417 695 aaKnown RBP13.97□□□□□ -0.17
LITAF-201ENST00000339430 CBLN2Q8IUK8 224 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 SAT2Q96F10 170 aaPredicted RBP13.97□□□□□ -0.17
LITAF-201ENST00000339430 RPL36A-HNRNPH2H7BZ11 118 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 JTBO76095 146 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 SULT1A2P50226 295 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 TSC22D1Q15714 1073 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 Q6ZRG5 221 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 ZDHHC23Q8IYP9 409 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 SLC35G3Q8N808 338 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 NEK7Q8TDX7 302 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 APH1AQ96BI3 265 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 RSRP1Q9BUV0 290 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 C12orf49Q9H741 205 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 LIPGQ9Y5X9 500 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 BOD1L1Q8NFC6 3051 aa13.97□□□□□ -0.17
LITAF-201ENST00000339430 E5RGE8 158 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 H7C1Q1 480 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 K7EM74 188 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 SCTP09683 121 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 SPIN3Q5JUX0 258 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 FAM122CQ6P4D5 195 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 IGFL3Q6UXB1 125 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 LGI3Q8N145 548 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 SECTM1Q8WVN6 248 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 ZNF488Q96MN9 340 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 MTCH1Q9NZJ7 389 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 ZDHHC8Q9ULC8 765 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 RAXQ9Y2V3 346 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 NSG2Q9Y328 171 aa13.96□□□□□ -0.17
LITAF-201ENST00000339430 NUDT19A8MXV4 375 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 CTRB1P17538 263 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 CAV2P51636 162 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 IGFBP7Q16270 282 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 CTRB2Q6GPI1 263 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 PLEKHA2Q9HB19 425 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 WFDC1Q9HC57 220 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 PRSS50Q9UI38 385 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 PURGQ9UJV8 347 aaKnown RBP13.96□□□□□ -0.18
LITAF-201ENST00000339430 PRELID1Q9Y255 219 aa13.96□□□□□ -0.18
LITAF-201ENST00000339430 K7ENP7 123 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 SYNGR1O43759 233 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 LILRA1O75019 489 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 NPBWR1P48145 328 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 ASCL1P50553 236 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 CEACAM21Q3KPI0 293 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 INO80CQ6PI98 192 aaPredicted RBP13.95□□□□□ -0.18
LITAF-201ENST00000339430 HAGHLQ6PII5 290 aaPredicted RBP13.95□□□□□ -0.18
LITAF-201ENST00000339430 LRTM2Q8N967 370 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 CCDC71LQ8N9Z2 235 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 APOBEC3DQ96AK3 386 aaPredicted RBP13.95□□□□□ -0.18
LITAF-201ENST00000339430 NRIP2Q9BQI9 281 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 RCL1Q9Y2P8 373 aaKnown RBP13.95□□□□□ -0.18
LITAF-201ENST00000339430 C3orf85A0A1B0GTC6 90 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 GAPDHP04406 335 aaKnown RBP13.95□□□□□ -0.18
LITAF-201ENST00000339430 GNRHRP30968 328 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 CD80P33681 288 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 UCP3P55916 312 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 FGF12P61328 243 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 NHLH2Q02577 135 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 HIKESHIQ53FT3 197 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 C10orf91Q5T1B1 145 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 ZDHHC11Q9H8X9 412 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 ATPIF1Q9UII2 106 aa13.95□□□□□ -0.18
LITAF-201ENST00000339430 FBXO9Q9UK97 447 aaPredicted RBP13.95□□□□□ -0.18
LITAF-201ENST00000339430 CARHSP1Q9Y2V2 147 aaKnown RBP13.95□□□□□ -0.18
LITAF-201ENST00000339430 RNASEK-C17orf49H0YIS7 233 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 TRAPPC2LH3BP13 241 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 MPPED1O15442 326 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 OR8U9P0C7N5 309 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 SWI5Q1ZZU3 235 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 BTNL8Q6UX41 500 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 MCEMP1Q8IX19 187 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 OR8U1Q8NH10 309 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 FAM122AQ96E09 287 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 SEC11CQ9BY50 192 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 Q9N2K0 584 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 CACNA1GO43497 2377 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 TRGV5A0A0B4J1U4 118 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 MKRN2OSH3BPM6 223 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 PRKACAP17612 351 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 DPPA2Q7Z7J5 298 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 TBC1D26Q86UD7 250 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 POM121L2Q96KW2 1035 aa13.94□□□□□ -0.18
LITAF-201ENST00000339430 RCC2Q9P258 522 aaKnown RBP13.94□□□□□ -0.18
LITAF-201ENST00000339430 NKX2-6A6NCS4 301 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 C9JQL5 133 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 ST8SIA3O43173 380 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 TSPAN9O75954 239 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 SFTA3P0C7M3 94 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 NFYBP25208 207 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 HERPUD1Q15011 391 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 ZNF818PQ6ZRF7 136 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 UBAC2Q8NBM4 344 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 Q8NFD4 153 aa13.93□□□□□ -0.18
LITAF-201ENST00000339430 CHD8Q9HCK8 2581 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms