RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 CYYR1Q96J86 154 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 RHBDL2Q9NX52 303 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 COMMD3Q9UBI1 195 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 MED13LQ71F56 2210 aa11.64□□□□□ -0.55
APOBEC3B-202ENST00000335760 TRBV23-1A0A0A0MS06 115 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 A0A0G2JMP0 313 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 A0A0X1KG70 313 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 A0A1W2PQ09 198 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 UBE2QL1A1L167 161 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 FUOMA2VDF0 154 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 FOXI3A8MTJ6 420 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 GLAP06280 429 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 ERP29P30040 261 aaKnown RBP11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 GLIPR1P48060 266 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 P2RX3P56373 397 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 TMEM50BP56557 158 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 MOGAT2Q3SYC2 334 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 DCAF12L2Q5VW00 463 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 MZT2AQ6P582 158 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 BTNL3Q6UXE8 466 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 CLEC9AQ6UXN8 241 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 C6orf201Q7Z4U5 140 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 RTN4RL2Q86UN3 420 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 SAMD12Q8N8I0 201 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 LY6G5BQ8NDX9 201 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 OR4M2Q8NGB6 313 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 OR10R2Q8NGX6 335 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 C8orf46Q8TAG6 207 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 PLPPR1Q8TBJ4 325 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 DACT3Q96B18 629 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 DGCR14Q96DF8 476 aaKnown RBP11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 SLC25A38Q96DW6 304 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 COQ2Q96H96 371 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 ARHGAP5-AS1Q96IT6 56 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 SULT4A1Q9BR01 284 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 FAAP24Q9BTP7 215 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 YAE1D1Q9NRH1 226 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 PLEKHJ1Q9NW61 149 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 ETAA1Q9NY74 926 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 CCDC59Q9P031 241 aaKnown RBP11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 INSIG2Q9Y5U4 225 aa11.63□□□□□ -0.55
APOBEC3B-202ENST00000335760 KIR2DS1A0A191URI9 304 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 MEX3AA1L020 520 aaKnown RBP11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 LIPFP07098 398 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 GATA3P23771 443 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 MEF2CQ06413 473 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 DYNC1I2Q13409 638 aaKnown RBP11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 RSBN1Q5VWQ0 802 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 FOXB2Q5VYV0 432 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 FAHD2BQ6P2I3 314 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 Q6ZTK2 550 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 CMTM4Q8IZR5 234 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 DYRK2Q92630 601 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 RAB3CQ96E17 227 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 FAHD2AQ96GK7 314 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 PECRQ9BY49 303 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 GSX1Q9H4S2 264 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 LPAR3Q9UBY5 353 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 KCNS2Q9ULS6 477 aa11.62□□□□□ -0.55
APOBEC3B-202ENST00000335760 A0A075B6Q4 140 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 hADV38S2A0JD32 116 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 ODAMA1E959 279 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 RAB27BO00194 218 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 ZNF273Q14593 569 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 PLAC9Q5JTB6 97 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 UBE2NLQ5JXB2 153 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 SLC35E4Q6ICL7 350 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 DCUN1D5Q9BTE7 237 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 ONECUT1Q9UBC0 465 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 KIF25Q9UIL4 384 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 HSF4Q9ULV5 492 aa11.61□□□□□ -0.55
APOBEC3B-202ENST00000335760 MEIKINA0A087WXM9 373 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 A0A1W2PPH5 198 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 TMEM30CPA0ZSE6 113 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 A6NHS1 94 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 HPGDSO60760 199 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 SCGNO76038 276 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 GNB3P16520 340 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 ARF6P62330 175 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 PAX5Q02548 391 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 PAX8Q06710 450 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 ZNF497Q6ZNH5 498 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 TRAPPC6BQ86SZ2 158 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 CCDC107Q8WV48 283 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 PHF21AQ96BD5 680 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 ABCG5Q9H222 651 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 C7orf69Q9H7B7 122 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 AK3Q9UIJ7 227 aa11.6□□□□□ -0.55
APOBEC3B-202ENST00000335760 ABCA1O95477 2261 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 ACANP16112 2415 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 HIVEP1P15822 2718 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 TRGV10A0A0A0MS01 117 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 TRAV39A0A0B4J263 110 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 A8MV72 311 aaPredicted RBP11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 J3QLI3 93 aa11.59□□□□□ -0.55
APOBEC3B-202ENST00000335760 MT-ND4P03905 459 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms