RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 HSD17B10Q99714 261 aaKnown RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 SYT11Q9BT88 431 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 NPTNQ9Y639 398 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 HCFC1P51610 2035 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 DHRS3O75911 302 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 PPP1CCP36873 323 aaKnown RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 KIR3DL2P43630 455 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 NAAAQ02083 359 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 WDR31Q8NA23 367 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 OR5R1Q8NH85 324 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 RAXQ9Y2V3 346 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 LRP6O75581 1613 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 WTIPA6NIX2 430 aaPredicted RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 SOCS7O14512 581 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 IQCF3P0C7M6 154 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 LPAR6P43657 344 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 CDX1P47902 265 aaPredicted RBP5.51□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF506Q5JVG8 444 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 SDF2Q99470 211 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 PLXNA1Q9UIW2 1896 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 HSF4Q9ULV5 492 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 USP3Q9Y6I4 520 aa5.51□□□□□ -1.53
CSMD1-201ENST00000335551 CDC14BO60729 498 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TYMSP04818 313 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 VDAC1P21796 283 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CSNK1EP49674 416 aaKnown RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF788Q6ZQV5 615 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SPAG8Q99932 426 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 DNASE2O00115 360 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 C1SP09871 688 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CD38P28907 300 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SERF2P84101 59 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZXDAP98168 799 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MEF2BQ02080 365 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 PSMG4Q5JS54 123 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CLEC18BQ6UXF7 455 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF600Q6ZNG1 722 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 PLEKHB1Q9UF11 243 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MOB4Q9Y3A3 225 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF324O75467 553 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 RNASE1P07998 156 aaKnown RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF250P15622 560 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 PRSS36Q5K4E3 855 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CA13Q8N1Q1 262 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM174Q8WUU8 243 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 LSM10Q969L4 123 aaKnown RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 FLYWCH2Q96CP2 140 aaKnown RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SFRP2Q96HF1 295 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SIGLEC11Q96RL6 698 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TXNRD2Q9NNW7 524 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CBLN4Q9NTU7 201 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 NCOA6Q14686 2063 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MT-CO3P00414 261 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CD74P04233 296 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SOD3P08294 240 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 EPHA8P29322 1005 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 INSM1Q01101 510 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 DEFB133Q30KQ1 61 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SP6Q3SY56 376 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 DMRTA1Q5VZB9 504 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 LINC00469Q8N7U9 141 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 NUBPLQ8TB37 319 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 GGACTQ9BVM4 153 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MS4A7Q9GZW8 240 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CA10Q9NS85 328 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 C1QTNF9BB2RNN3 333 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM262E9PQX1 116 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TNFSF11O14788 317 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CD22P20273 847 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 C12orf73Q69YU5 71 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SLC25A42Q86VD7 318 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MARVELD3Q96A59 401 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 SPANXA1Q9NS26 97 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF275Q9NSD4 429 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 JKAMPQ9P055 326 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 STARD10Q9Y365 291 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TRDCB7Z8K6 153 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 GAPDHP04406 335 aaKnown RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ACVR1Q04771 509 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MYBPHQ13203 477 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MOB3BQ86TA1 216 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 KLF16Q9BXK1 252 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 OPN3Q9H1Y3 402 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 TANC2Q9HCD6 1990 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 FCGR3BO75015 233 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ALOX12BO75342 701 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 EIF3GO75821 320 aaKnown RBP eCLIP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 RELQ04864 619 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ERV3-1Q14264 604 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF880Q6PDB4 577 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 NOXO1Q8NFA2 376 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 INSM2Q96T92 566 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-201ENST00000335551 RASL11BQ9BPW5 248 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 C16orf70Q9BSU1 422 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 KIR3DX1Q9H7L2 352 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 ADAMTS5Q9UNA0 930 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 PROCRQ9UNN8 238 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 CTDSPLO15194 276 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 MFAP2P55001 183 aa5.5□□□□□ -1.53
CSMD1-201ENST00000335551 NTHL1P78549 312 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms