RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 ZNF205O95201 554 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 PPYP01298 95 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 OR2F1Q13607 317 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 ZNF146Q15072 292 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 MOB1BQ7L9L4 216 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 RTN4IP1Q8WWV3 396 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-201ENST00000331456 C2orf50Q96LR7 162 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 PRR13Q9NZ81 148 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 TREM2Q9NZC2 230 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 TNFSF18Q9UNG2 199 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 A6NLC8 198 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 A8MXE2 369 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 BET1O15155 118 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 OR2H2O95918 312 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 IFNA21P01568 189 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 BMP5P22003 454 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 AP2S1P53680 142 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-201ENST00000331456 RAB14P61106 215 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 ZNF345Q14585 488 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 SHEQ5VZ18 495 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 MRGPRGQ86SM5 289 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 FAM185AQ8N0U4 392 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 GALNT14Q96FL9 552 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 SUCNR1Q9BXA5 334 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 RASL12Q9NYN1 266 aa11.86□□□□□ -0.51
TRAIP-201ENST00000331456 SIRPB1O00241 398 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 HOXB5P09067 269 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 SCTP09683 121 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 ZNF880Q6PDB4 577 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 ZNF565Q8N9K5 539 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 INO80EQ8NBZ0 244 aaPredicted RBP11.85□□□□□ -0.51
TRAIP-201ENST00000331456 OR4A4PQ8NGN8 299 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 USB1Q9BQ65 265 aaKnown RBP11.85□□□□□ -0.51
TRAIP-201ENST00000331456 TLNRD1Q9H1K6 362 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
TRAIP-201ENST00000331456 IGHV3-64DA0A0J9YX35 117 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 KANTRA0A1W2PQU2 76 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 SLC33A1O00400 549 aaPredicted RBP11.84□□□□□ -0.51
TRAIP-201ENST00000331456 PET100P0DJ07 73 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 RPS23P62266 143 aaKnown RBP11.84□□□□□ -0.51
TRAIP-201ENST00000331456 HLA-DRB3P79483 266 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 RBPJQ06330 500 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 PHLDA2Q53GA4 152 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 Q6ZR03 302 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 SLC51BQ86UW2 128 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 KCNRGQ8N5I3 272 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 TMEM165Q9HC07 324 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 HES4Q9HCC6 221 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 MSL2Q9HCI7 577 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 ELOVL5Q9NYP7 299 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 MBD2Q9UBB5 411 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 PCDHB10Q9UN67 800 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 A0A0G2JNJ9 132 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 CFDP00746 253 aaPredicted RBP11.84□□□□□ -0.51
TRAIP-201ENST00000331456 GLRXP35754 106 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
TRAIP-201ENST00000331456 Q9UFV3 132 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 ZNF835Q9Y2P0 537 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 ESPL1Q14674 2120 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 AKAP13Q12802 2813 aa11.84□□□□□ -0.51
TRAIP-201ENST00000331456 TUBAL3A6NHL2 446 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 HAND1O96004 215 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 ZNF250P15622 560 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 NUP62P37198 522 aaPredicted RBP11.83□□□□□ -0.52
TRAIP-201ENST00000331456 FAM27E3Q08E93 113 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 TMEM187Q14656 261 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 C11orf53Q8IXP5 236 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 DCUN1D4Q92564 292 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 SNRNP40Q96DI7 357 aaKnown RBP11.83□□□□□ -0.52
TRAIP-201ENST00000331456 OR10C1Q96KK4 312 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 OR14J1Q9UGF5 321 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 DUSP13Q9UII6 198 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
TRAIP-201ENST00000331456 SVILO95425 2214 aa11.83□□□□□ -0.52
TRAIP-201ENST00000331456 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 ERVH48-1M5A8F1 160 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 TUSC2O75896 110 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 IGHV3-13P01766 116 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 OR5AC1P0C628 307 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 FAM87AP0C7U9 286 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 KLF3P57682 345 aaPredicted RBP11.82□□□□□ -0.52
TRAIP-201ENST00000331456 HERPUD1Q15011 391 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 PRAMEF6Q5VXH4 476 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 ZNF497Q6ZNH5 498 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 C20orf204Q6ZNR8 217 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 LGI3Q8N145 548 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 OR10J5Q8NHC4 309 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 SECTM1Q8WVN6 248 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 SLC5A7Q9GZV3 580 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 GSKIPQ9P0R6 139 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 TRAPPC2LQ9UL33 140 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 LOC400499M0QZD8 3231 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 TRBV6-7A0A0A0MS04 114 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 hCG_1807616A0A1W2PRN6 198 aa11.82□□□□□ -0.52
TRAIP-201ENST00000331456 GPR31O00270 319 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms