RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ELLP55199 621 aaPredicted RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 ERVS71-1P61550 626 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 YPEL5P62699 121 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 IL24Q13007 206 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 Q6ZSR3 168 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 CENPVQ7Z7K6 275 aaPredicted RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 MRPL41Q8IXM3 137 aaKnown RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 CAPNS2Q96L46 248 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 GABRG3Q99928 467 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 VSIRQ9H7M9 311 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 PTRH2Q9Y3E5 179 aaKnown RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 CDH23Q9H251 3354 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 CLEC18AA5D8T8 446 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 A6NNC1 897 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 FOSL2P15408 326 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 TUBG1P23258 451 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 FGF8P55075 233 aaPredicted RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 MTCP1P56278 107 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 HERV-K104P61576 105 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 GNB2P62879 340 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 ADIRFQ15847 76 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 EXT1Q16394 746 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 PRSS8Q16651 343 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 RSPO4Q2I0M5 234 aaPredicted RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 LCN15Q6UWW0 184 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 UEVLDQ8IX04 471 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 CLEC18CQ8NCF0 446 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 OR2V1Q8NHB1 315 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 NAT8Q9UHE5 227 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 IL17BQ9UHF5 180 aa11.04□□□□□ -0.64
CCDC60-201ENST00000327554 MRPS18CQ9Y3D5 142 aaKnown RBP11.04□□□□□ -0.64
CCDC60-201ENST00000327554 PPP5D1E7EU14 171 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 TOX3O15405 576 aaPredicted RBP11.03□□□□□ -0.64
CCDC60-201ENST00000327554 SPRY1O43609 319 aaPredicted RBP11.03□□□□□ -0.64
CCDC60-201ENST00000327554 CHST1O43916 411 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 C1orf61Q13536 156 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 NMSQ5H8A3 153 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 ACTL10Q5JWF8 245 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 NCR3LG1Q68D85 454 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF695Q8IW36 515 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 FAM185AQ8N0U4 392 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 OR1N1Q8NGS0 311 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 TMEM37Q8WXS4 190 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 ELOVL1Q9BW60 279 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF286AQ9HBT8 521 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF160Q9HCG1 818 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 KNL1Q8NG31 2342 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 NXPH3O95157 252 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 PPYP01298 95 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 HLA-HP01893 362 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 RPLP1P05386 114 aaKnown RBP11.03□□□□□ -0.64
CCDC60-201ENST00000327554 GNRHRP30968 328 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 FAM3BP58499 235 aaPredicted RBP11.03□□□□□ -0.64
CCDC60-201ENST00000327554 MYBPHQ13203 477 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF774Q6NX45 483 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 BTNL3Q6UXE8 466 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
CCDC60-201ENST00000327554 CYP2G1PQ6ZSU1 146 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 TBC1D26Q86UD7 250 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 PRR18Q8N4B5 295 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 GBGT1Q8N5D6 347 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 AGMATQ9BSE5 352 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 PCGF1Q9BSM1 259 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 FUT9Q9Y231 359 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 UBE2J1Q9Y385 318 aaPredicted RBP11.03□□□□□ -0.64
CCDC60-201ENST00000327554 RNF115Q9Y4L5 304 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
CCDC60-201ENST00000327554 IGKV1-27A0A075B6S5 117 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 CEBPZOSA8MTT3 80 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 LINC00614P0C842 121 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 HOXB2P14652 356 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 CTHP32929 405 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 GALR1P47211 349 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 OR3A1P47881 315 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 NPBWR2P48146 333 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 MRPS11P82912 194 aaKnown RBP11.02□□□□□ -0.64
CCDC60-201ENST00000327554 HIST3H3Q16695 136 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 RSPO1Q2MKA7 263 aaPredicted RBP11.02□□□□□ -0.64
CCDC60-201ENST00000327554 ZNF573Q86YE8 665 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 RSG1Q9BU20 258 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 Q9N2K0 584 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 FKBP11Q9NYL4 201 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 SEMA5BQ9P283 1151 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 PRSS50Q9UI38 385 aa11.02□□□□□ -0.64
CCDC60-201ENST00000327554 VSTM2BA6NLU5 285 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 B4DGG1 531 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 ZNF814B7Z6K7 855 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 F5H5K5 113 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 M0QZK8 103 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 GGCTO75223 188 aaKnown RBP11.02□□□□□ -0.65
CCDC60-201ENST00000327554 CST2P09228 141 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 TNFRSF4P43489 277 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 IDH3GP51553 393 aaPredicted RBP11.02□□□□□ -0.65
CCDC60-201ENST00000327554 YAF2Q8IY57 180 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 ZNF295-AS1Q8N0V1 137 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 WFIKKN1Q96NZ8 548 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 SMIM7Q9BQ49 75 aa11.02□□□□□ -0.65
CCDC60-201ENST00000327554 COPS7AQ9UBW8 275 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms