RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 IMMP1LQ96LU5 166 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 PLA2G3Q9NZ20 509 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 TMED3Q9Y3Q3 217 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 TERTO14746 1132 aaKnown RBP11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 CD5P06127 495 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 SEC11BP0C7V7 166 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 DANCRP0C864 163 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 SRD5A2P31213 254 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 IL15RAQ13261 267 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 HABP2Q14520 560 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 THNSL2Q86YJ6 484 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 GNG13Q9P2W3 67 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 TUBD1Q9UJT1 453 aa11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 FOXD3Q9UJU5 478 aaPredicted RBP11.13□□□□□ -0.63
HMGCS1-201ENST00000325110 K7ESF4 209 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 SYNGR4O95473 234 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 MT-ND4LP03901 98 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 LYL1P12980 280 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 NDUFA6P56556 154 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 MLF1P58340 268 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 KIAA0141Q14154 515 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 HMGN3Q15651 99 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 OR2B11Q5JQS5 317 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF561Q8N587 486 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 SSC4DQ8WTU2 575 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 HES7Q9BYE0 225 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 IFNA5P01569 189 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 ALDH3B1P43353 468 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 FOXG1P55316 489 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 RAB2AP61019 212 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 CCL20P78556 96 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 IL13RA2Q14627 380 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 STX12Q86Y82 276 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 MOB3AQ96BX8 217 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 SLC25A31Q9H0C2 315 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 PPP1R3CQ9UQK1 317 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 TPRP12270 2363 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 LY6G6EA0A0G2JKS1 128 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 A0A1W2PR80 420 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 IGSF23A1L1A6 192 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 CHST1O43916 411 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 WDR1O75083 606 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 NGFP01138 241 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 RAB5AP20339 215 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 CRYGSP22914 178 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 OTX1P32242 354 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 RPS16P62249 146 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 TUSC5Q8IXB3 177 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 C10orf35Q96D05 121 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 PROK2Q9HC23 129 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 U3KQA8 63 aa11.12□□□□□ -0.63
HMGCS1-201ENST00000325110 ROS1P08922 2347 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 PRR14LQ5THK1 2151 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 TRAV20A0A0B4J274 112 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 RRP8O43159 456 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 IFNA4P05014 189 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 ACAA1P09110 424 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 STARD6P59095 220 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 RAB11AP62491 216 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 ABHD17BQ5VST6 288 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 ZNF818PQ6ZRF7 136 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 IL22RA1Q8N6P7 574 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 CPEB3Q8NE35 698 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 SCGB1C1Q8TD33 95 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 WDR54Q9H977 334 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 HSF4Q9ULV5 492 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 FRYQ5TBA9 3013 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 hCG_38984A0A1B0GV85 526 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 FOXI3A8MTJ6 420 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 H0YL77 283 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 H7C1Q1 480 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 SYNGR1O43759 233 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 CELA3AP09093 270 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 TUBG1P23258 451 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 ELLP55199 621 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 TCTEX1D2Q8WW35 142 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 OR14J1Q9UGF5 321 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 ERRFI1Q9UJM3 462 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 POMT1Q9Y6A1 747 aa11.11□□□□□ -0.63
HMGCS1-201ENST00000325110 HMGB3O15347 200 aaKnown RBP11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 LAMTOR5O43504 91 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 FGF5P12034 268 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 DUSP3P51452 185 aaPredicted RBP11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 RAB1AP62820 205 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 C4orf17Q53FE4 359 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 DCAF12Q5T6F0 453 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 ZDHHC23Q8IYP9 409 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 LILRB2Q8N423 598 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 TMEM252Q8N6L7 170 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 NTNG2Q96CW9 530 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 IGKV1D-13A0A0B4J2D9 117 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 SIRPB1O00241 398 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 IFNA17P01571 189 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 IGKV1-13P0DP09 117 aa11.1□□□□□ -0.63
HMGCS1-201ENST00000325110 FGF8P55075 233 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms