RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PTGER4P35408 488 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 RSU1Q15404 277 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 MIDNQ504T8 468 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 TMEM128Q5BJH2 165 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 C9orf152Q5JTZ5 239 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 RIPPLY2Q5TAB7 128 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 OR2T2Q6IF00 324 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 FOXL2NBQ6ZUU3 175 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 SLC25A26Q70HW3 274 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 MDP1Q86V88 176 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 THRSPQ92748 146 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 MRPL24Q96A35 216 aaKnown RBP6.54□□□□□ -1.36
TRIM55-202ENST00000315962 BORCS8Q96FH0 119 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 ZDHHC11Q9H8X9 412 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 SPACA1Q9HBV2 294 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 PLEKHJ1Q9NW61 149 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 A0A0U1RQV5 110 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 DBX1A6NMT0 343 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 TMEM14DPA8MWL7 114 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 BPNT1O95861 308 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 H2AFB1P0C5Y9 115 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 CTSSP25774 331 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 NBL1P41271 181 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF133P52736 654 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-202ENST00000315962 SCAND1P57086 179 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 TLE1Q04724 770 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 EIF2S3LQ2VIR3 472 aaKnown RBP6.54□□□□□ -1.36
TRIM55-202ENST00000315962 ALKBH6Q3KRA9 238 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 PHLDA2Q53GA4 152 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 UQCC3Q6UW78 93 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 CXorf67Q86X51 503 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-202ENST00000315962 FBXL14Q8N1E6 418 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 ZDHHC22Q8N966 263 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 C9orf106Q8NAJ2 232 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 KCNG3Q8TAE7 436 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 EXTL1Q92935 676 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 HIST1H2BAQ96A08 127 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 KIRREL1Q96J84 757 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 SLC5A7Q9GZV3 580 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 GSN-AS1Q9NRJ2 163 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 MIOXQ9UGB7 285 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 CARHSP1Q9Y2V2 147 aaKnown RBP6.54□□□□□ -1.36
TRIM55-202ENST00000315962 MMP24Q9Y5R2 645 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 URGCP-MRPS24S4R325 110 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 PKDREJQ9NTG1 2253 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 INTS1Q8N201 2190 aaKnown RBP6.54□□□□□ -1.36
TRIM55-202ENST00000315962 GTF3C1Q12789 2109 aa6.54□□□□□ -1.36
TRIM55-202ENST00000315962 IGKV3D-15A0A087WSY6 115 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 DLL1O00548 723 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 SFT2D2O95562 160 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 LY86O95711 162 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 MELTFP08582 738 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 HIST1H1DP16402 221 aaKnown RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 CCL1P22362 96 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 FCGR2CP31995 323 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 CAV2P51636 162 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 PCBD1P61457 104 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 AADACL3Q5VUY0 350 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 FBXW9Q5XUX1 488 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 C17orf78Q8N4C9 275 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 SNIP1Q8TAD8 396 aaKnown RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 SLAMF9Q96A28 289 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 SEC11CQ9BY50 192 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 OPN3Q9H1Y3 402 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 BCO1Q9HAY6 547 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 RYDENQ9NUL5 291 aaKnown RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 GPR132Q9UNW8 380 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 V9GYS6 101 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 GPR37O15354 613 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 ST8SIA5O15466 376 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 YIF1AO95070 293 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 PRH1P02810 166 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 HKR1P10072 659 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 CA6P23280 308 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 OMGP23515 440 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 WNT5AP41221 380 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 RBP2P50120 134 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 TMEM33P57088 247 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 RAB5BP61020 215 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 SSBP1Q04837 148 aaKnown RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 PRSS54Q6PEW0 395 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 MRPL21Q7Z2W9 205 aaKnown RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 RNF122Q9H9V4 155 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 TMEM100Q9NV29 134 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 PUS1Q9Y606 427 aaKnown RBP eCLIP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 TRAV17A0A0B4J275 112 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 C7orf77A4D0Y5 90 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 DHRS7CA6NNS2 312 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF727A8MUV8 499 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 C1orf196B1AJZ1 125 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 K7EPK0 472 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 OR7C1O76099 320 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 FBP1P09467 338 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 IGHV1-2P23083 117 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 RPL12P30050 165 aaKnown RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 PLA2G5P39877 138 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 RNPS1Q15287 305 aaKnown RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 Q3ZCU0 254 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 FAM180AQ6UWF9 173 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms