RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TRGV8A0A0C4DH27 118 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 RHBDL1O75783 438 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 MRPS11P82912 194 aaKnown RBP12.07□□□□□ -0.48
CLCN6-201ENST00000312413 NAAAQ02083 359 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 LRRC75AQ8NAA5 344 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 OR2D3Q8NGH3 330 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 METTL12A8MUP2 240 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 H3BVH4 76 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 ATP6V0CP27449 155 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 TMEM91Q6ZNR0 172 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 OR10D3Q8NH80 312 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 SLC25A33Q9BSK2 321 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 CCL28Q9NRJ3 127 aa12.07□□□□□ -0.48
CLCN6-201ENST00000312413 A0A1W2PR80 420 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 NKX2-6A6NCS4 301 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 K7ESF4 209 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 GLULP15104 373 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 PAFAH1B2P68402 229 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 IFITM3Q01628 133 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 F12P00748 615 aaPredicted RBP12.06□□□□□ -0.48
CLCN6-201ENST00000312413 CT62P0C5K7 136 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 ZNF83P51522 516 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 PRRX1P54821 245 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 ZNF273Q14593 569 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 VN1R4Q7Z5H5 301 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 ZNF738Q8NE65 137 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 MKRN2OSH3BPM6 223 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 PATE4P0C8F1 98 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 HIST1H1EP10412 219 aaKnown RBP12.06□□□□□ -0.48
CLCN6-201ENST00000312413 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
CLCN6-201ENST00000312413 WDFY1Q8IWB7 410 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 OR4D11Q8NGI4 311 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 PERPQ96FX8 193 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 RGPD1P0DJD0 1748 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 TRAV8-7A0A075B6U6 113 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 TRBV5-3A0A0A0MS03 114 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 SRFP11831 508 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 DLX1P56177 255 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 CST9Q5W186 159 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 OR8A1Q8NGG7 326 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 ZDHHC16Q969W1 377 aa12.06□□□□□ -0.48
CLCN6-201ENST00000312413 A0A1B0GU03 582 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 CXorf1O96002 111 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 CCL2P13500 99 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 AREGP15514 252 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 BRS3P32247 399 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 LSM6P62312 80 aaKnown RBP12.05□□□□□ -0.48
CLCN6-201ENST00000312413 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 NMBP08949 121 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 MYF5P13349 255 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 FAM209BQ5JX69 171 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 TMEM240Q5SV17 173 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 TMEM65Q6PI78 240 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 ANKRD37Q7Z713 158 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 LRRC3BQ96PB8 259 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 MRPL37Q9BZE1 423 aaKnown RBP12.05□□□□□ -0.48
CLCN6-201ENST00000312413 CXXC4Q9H2H0 198 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 FLRT3Q9NZU0 649 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 N4BP2Q86UW6 1770 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-201ENST00000312413 IGHV3-13P01766 116 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 IGHV3-7P01780 117 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 GUCA2BQ16661 112 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 ISXQ2M1V0 245 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 TMEM211Q6ICI0 200 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 ASB5Q8WWX0 329 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 ZFP64Q9NPA5 681 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 AMMECR1Q9Y4X0 333 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-201ENST00000312413 OOEPA6NGQ2 149 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 ACP1P24666 158 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 ZIC1Q15915 447 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 TNXAQ16473 311 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 C16orf82Q7Z2V1 217 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 PCDHGA9Q9Y5G4 932 aaKnown RBP12.05□□□□□ -0.48
CLCN6-201ENST00000312413 SPAG17Q6Q759 2223 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 ATG4DQ86TL0 474 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-201ENST00000312413 H1FOOQ8IZA3 346 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-201ENST00000312413 PPP1R3EQ9H7J1 279 aa12.05□□□□□ -0.48
CLCN6-201ENST00000312413 VSIG8P0DPA2 414 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 MUC1P15941 1255 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-201ENST00000312413 CXCL2P19875 107 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 TNFAIP6P98066 277 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-201ENST00000312413 MRGPRFQ96AM1 343 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 TRAV17A0A0B4J275 112 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 IGHV5-51A0A0C4DH38 117 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-201ENST00000312413 PRSS12P56730 875 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 SKP2Q13309 424 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 TGIF2LYQ8IUE0 185 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 STXBP6Q8NFX7 210 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 SGMS2Q8NHU3 365 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 FLYWCH2Q96CP2 140 aaKnown RBP12.04□□□□□ -0.48
CLCN6-201ENST00000312413 TM4SF19Q96DZ7 209 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 RBM14Q96PK6 669 aaKnown RBP12.04□□□□□ -0.48
CLCN6-201ENST00000312413 TMEM140Q9NV12 185 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 PLA2G3Q9NZ20 509 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 MFSD2BA6NFX1 497 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 SHISA7A6NL88 538 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
CLCN6-201ENST00000312413 NPY1RP25929 384 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 555.2 ms