RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 OR14J1Q9UGF5 321 aa12.58□□□□□ -0.4
UBXN1-202ENST00000301935 IGKV1D-17A0A075B6S4 117 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 A0A0A6YYD4 124 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 SULT1C2O00338 296 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 IGHV2-70P01814 119 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 GPR6P46095 362 aaPredicted RBP12.57□□□□□ -0.4
UBXN1-202ENST00000301935 TAS2R20P59543 309 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 SCN1BQ07699 218 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 IL18Q14116 193 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 ZNF846Q147U1 533 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 ZNF260Q3ZCT1 412 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 ATAD3CQ5T2N8 411 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 SFRP4Q6FHJ7 346 aaPredicted RBP12.57□□□□□ -0.4
UBXN1-202ENST00000301935 SIGIRRQ6IA17 410 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 DCDC5Q6ZRR9 648 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 BATF2Q8N1L9 274 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 GDPD1Q8N9F7 314 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 SNX22Q96L94 193 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 PECRQ9BY49 303 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 FAM234AQ9H0X4 552 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 RIMS4Q9H426 269 aaPredicted RBP12.57□□□□□ -0.4
UBXN1-202ENST00000301935 AUNIPQ9H7T9 357 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 SCPEP1Q9HB40 452 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 AKIP1Q9NQ31 210 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 ZNF222Q9UK12 451 aa12.57□□□□□ -0.4
UBXN1-202ENST00000301935 FUOMA2VDF0 154 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 LYNX1G3V0Z9 82 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 TNFRSF13BO14836 293 aaPredicted RBP12.56□□□□□ -0.4
UBXN1-202ENST00000301935 LYNX1P0DP58 116 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 DUSP1P28562 367 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 CD40LGP29965 261 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 PRSS3P35030 304 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 CBX5P45973 191 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 GABRA2P47869 451 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 SNU13P55769 128 aaKnown RBP12.56□□□□□ -0.4
UBXN1-202ENST00000301935 IL13RA1P78552 427 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 MRPS15P82914 257 aaKnown RBP12.56□□□□□ -0.4
UBXN1-202ENST00000301935 PAX5Q02548 391 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 ZMYND11Q15326 602 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 PAN3Q58A45 887 aaKnown RBP12.56□□□□□ -0.4
UBXN1-202ENST00000301935 HACD4Q5VWC8 232 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 ZNF788Q6ZQV5 615 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 GLCCI1Q86VQ1 547 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 SUMF2Q8NBJ7 301 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 ARHGAP5-AS1Q96IT6 56 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 DPCDQ9BVM2 203 aaPredicted RBP12.56□□□□□ -0.4
UBXN1-202ENST00000301935 DCAF16Q9NXF7 216 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 IL36RNQ9UBH0 155 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 MIOXQ9UGB7 285 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 METRNQ9UJH8 293 aa12.56□□□□□ -0.4
UBXN1-202ENST00000301935 MRPS7Q9Y2R9 242 aaKnown RBP12.56□□□□□ -0.4
UBXN1-202ENST00000301935 IGHV3OR15-7A0A075B7D8 119 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 A0A0A6YYJ9 748 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 TRAV24A0A0B4J272 114 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 B4DSR2 109 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 SLC33A1O00400 549 aaPredicted RBP12.55□□□□□ -0.4
UBXN1-202ENST00000301935 MFNGO00587 321 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 GPR37O15354 613 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 SIGLEC5O15389 551 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 VENTXO95231 258 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 HLA-DQB1P01920 261 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 GYPAP02724 150 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 CSN2P05814 226 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 PPP5CP53041 499 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 COL10A1Q03692 680 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 SSBP1Q04837 148 aaKnown RBP12.55□□□□□ -0.4
UBXN1-202ENST00000301935 C11orf91Q3C1V1 193 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 MOGAT2Q3SYC2 334 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 PLAC9Q5JTB6 97 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 NKAPLQ5M9Q1 402 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 FAM201AQ5SY85 155 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 CD177Q8N6Q3 437 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 OR5T2Q8NGG2 359 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 ZFAND2BQ8WV99 257 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 ST8SIA4Q92187 359 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 SEH1LQ96EE3 360 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 TMEM246Q9BRR3 403 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 V9GYH0 126 aa12.55□□□□□ -0.4
UBXN1-202ENST00000301935 A0A0G2JMP0 313 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 A0A0X1KG70 313 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 GABARAPH6UMI1 98 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 K7N7A8 449 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 SIRPB1O00241 398 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 MGST3O14880 152 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 WIPF1O43516 503 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 GSTZ1O43708 216 aaPredicted RBP12.54□□□□□ -0.4
UBXN1-202ENST00000301935 CD3GP09693 182 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 GNB3P16520 340 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 GNG2P59768 71 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 PYDC2Q56P42 97 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 NLRC3Q7RTR2 1065 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 C6orf201Q7Z4U5 140 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 MFSD4AQ8N468 514 aa12.54□□□□□ -0.4
UBXN1-202ENST00000301935 ASCC1Q8N9N2 400 aaKnown RBP12.54□□□□□ -0.4
UBXN1-202ENST00000301935 OR4M2Q8NGB6 313 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms