RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 BTNL8Q6UX41 500 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 ARRDC1Q8N5I2 433 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 ZNF611Q8N823 705 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 LINC00470Q9BZP3 86 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 FAM157AC9JC47 383 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 MT-ND4LP03901 98 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 ARG1P05089 322 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 GLI4P10075 376 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 FAM189A2Q15884 450 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 LHFPL2Q6ZUX7 228 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 ZNF2Q9BSG1 426 aaPredicted RBP18.86■□□□□ 0.61
TPM4-201ENST00000300933 IL36RNQ9UBH0 155 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 C7orf77A4D0Y5 90 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 SFT2D2O95562 160 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 IGHV2-70P01814 119 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 OR8U8P0C7N1 319 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 DVL1P1P54792 670 aaPredicted RBP18.86■□□□□ 0.61
TPM4-201ENST00000300933 SOX8P57073 446 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 NCMAPQ5T1S8 102 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 FAM24BQ8N5W8 94 aa18.86■□□□□ 0.61
TPM4-201ENST00000300933 MUC6Q6W4X9 2439 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 DUSP1P28562 367 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 OSR2Q8N2R0 312 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 RAB18Q9NP72 206 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 OSGIN2Q9Y236 505 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 HSPB6O14558 160 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 XRCC2O43543 280 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 OR7C1O76099 320 aaPredicted RBP18.85■□□□□ 0.61
TPM4-201ENST00000300933 IL18BPO95998 194 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 FUT6P51993 359 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 CLEC9AQ6UXN8 241 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 SLAMF9Q96A28 289 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 MARS2Q96GW9 593 aaKnown RBP18.85■□□□□ 0.61
TPM4-201ENST00000300933 PRDM14Q9GZV8 571 aa18.85■□□□□ 0.61
TPM4-201ENST00000300933 METTL1Q9UBP6 276 aaKnown RBP18.85■□□□□ 0.61
TPM4-201ENST00000300933 IGHV3-64DA0A0J9YX35 117 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 SLC22A20A6NK97 555 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 TNFSF10P50591 281 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 EIF5AL1Q6IS14 154 aaKnown RBP18.84■□□□□ 0.61
TPM4-201ENST00000300933 COLCA1Q6ZS62 124 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 MRPL21Q7Z2W9 205 aaKnown RBP18.84■□□□□ 0.61
TPM4-201ENST00000300933 LHFPL1Q86WI0 220 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 RGCCQ9H4X1 137 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 AMDHD2Q9Y303 409 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 ESPL1Q14674 2120 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 SULT1A2P50226 295 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 PRDX4Q13162 271 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 CLN3Q13286 438 aa18.84■□□□□ 0.61
TPM4-201ENST00000300933 REPIN1Q9BWE0 567 aaKnown RBP18.84■□□□□ 0.61
TPM4-201ENST00000300933 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.84■□□□□ 0.61
TPM4-201ENST00000300933 ZNF724A8MTY0 619 aa18.83■□□□□ 0.61
TPM4-201ENST00000300933 RPL36A-HNRNPH2H7BZ11 118 aa18.83■□□□□ 0.61
TPM4-201ENST00000300933 CHATP28329 748 aa18.83■□□□□ 0.61
TPM4-201ENST00000300933 TAS2R46P59540 309 aa18.83■□□□□ 0.61
TPM4-201ENST00000300933 RNF212Q495C1 297 aa18.83■□□□□ 0.61
TPM4-201ENST00000300933 CCDC54Q8NEL0 328 aa18.83■□□□□ 0.61
TPM4-201ENST00000300933 TOMM40LQ969M1 308 aa18.83■□□□□ 0.61
TPM4-201ENST00000300933 ASCL3Q9NQ33 180 aa18.83■□□□□ 0.61
TPM4-201ENST00000300933 RYDENQ9NUL5 291 aaKnown RBP18.83■□□□□ 0.61
TPM4-201ENST00000300933 CDRT15L2A8MXV6 281 aa18.83■□□□□ 0.6
TPM4-201ENST00000300933 RAB5AP20339 215 aa18.83■□□□□ 0.6
TPM4-201ENST00000300933 RNPS1Q15287 305 aaKnown RBP18.83■□□□□ 0.6
TPM4-201ENST00000300933 ACTBL2Q562R1 376 aa18.83■□□□□ 0.6
TPM4-201ENST00000300933 MYPOPQ86VE0 399 aaPredicted RBP18.83■□□□□ 0.6
TPM4-201ENST00000300933 SPSB4Q96A44 273 aa18.83■□□□□ 0.6
TPM4-201ENST00000300933 TCEAL7Q9BRU2 100 aa18.83■□□□□ 0.6
TPM4-201ENST00000300933 SPACA1Q9HBV2 294 aa18.83■□□□□ 0.6
TPM4-201ENST00000300933 KPTNQ9Y664 436 aa18.83■□□□□ 0.6
TPM4-201ENST00000300933 HKR1P10072 659 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 FXYD4P59646 89 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 C9orf152Q5JTZ5 239 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 Q6ZPA2 131 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 HPSE2Q8WWQ2 592 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 POM121L2Q96KW2 1035 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 C2orf50Q96LR7 162 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 ZNF488Q96MN9 340 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 BCL3P20749 454 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 PAX6P26367 422 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 DAZAP2Q15038 168 aaPredicted RBP18.82■□□□□ 0.6
TPM4-201ENST00000300933 TCTEX1D2Q8WW35 142 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 EIF5A2Q9GZV4 153 aaKnown RBP18.82■□□□□ 0.6
TPM4-201ENST00000300933 ANXA10Q9UJ72 324 aa18.82■□□□□ 0.6
TPM4-201ENST00000300933 CELA3BP08861 270 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 OR5H8P0DN80 308 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 LYL1P12980 280 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 FPR2P25090 351 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 WNT5AP41221 380 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 GLP1RP43220 463 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 ZNF616Q08AN1 781 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 A0A1B0GV50 99 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 MED19A0JLT2 244 aaPredicted RBP18.81■□□□□ 0.6
TPM4-201ENST00000300933 TSPAN15O95858 294 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 IGHV2-5P01817 119 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 EIF2S3P41091 472 aaKnown RBP18.81■□□□□ 0.6
TPM4-201ENST00000300933 POC1AQ8NBT0 407 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 ZNF442Q9H7R0 627 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 PARP11Q9NR21 331 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 FBXL17Q9UF56 701 aa18.81■□□□□ 0.6
TPM4-201ENST00000300933 A0A1W2PPE2 198 aa18.8■□□□□ 0.6
TPM4-201ENST00000300933 EIF5AP63241 154 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms