RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 PTPMT1Q8WUK0 201 aaPredicted RBP8.88□□□□□ -0.99
CLDN1-201ENST00000295522 ATP5SQ99766 215 aa8.88□□□□□ -0.99
CLDN1-201ENST00000295522 LIME1Q9H400 295 aa8.88□□□□□ -0.99
CLDN1-201ENST00000295522 SLC39A9Q9NUM3 307 aa8.88□□□□□ -0.99
CLDN1-201ENST00000295522 ZNF816-ZNF321PA0A0X1KG74 233 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 SMIM10L1P0DMW3 83 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 MTCP1P56278 107 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 TMEM183BQ1AE95 376 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 LEMD1Q68G75 181 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 BAGE3Q86Y29 109 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 BAGE2Q86Y30 109 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 CMTM2Q8TAZ6 248 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 SMIM10Q96HG1 83 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 HSPB9Q9BQS6 159 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 IGFLR1Q9H665 355 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 CDH20Q9HBT6 801 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 SERPINE3A8MV23 424 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 ZNF737O75373 536 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 ZNF16P17020 682 aaPredicted RBP8.87□□□□□ -0.99
CLDN1-201ENST00000295522 EGR1P18146 543 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 MSX1P28360 303 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 RABIFP47224 123 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 RPS16P62249 146 aaKnown RBP8.87□□□□□ -0.99
CLDN1-201ENST00000295522 C1orf61Q13536 156 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 ACOT6Q3I5F7 207 aaPredicted RBP8.87□□□□□ -0.99
CLDN1-201ENST00000295522 ZNF519Q8TB69 540 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 RNF133Q8WVZ7 376 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 TM4SF19Q96DZ7 209 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 ZBP1Q9H171 429 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 RYDENQ9NUL5 291 aaKnown RBP8.87□□□□□ -0.99
CLDN1-201ENST00000295522 ZNF319Q9P2F9 582 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 FAM186AA6NE01 2351 aa8.87□□□□□ -0.99
CLDN1-201ENST00000295522 TCRBV21S2A2A0A5A6 115 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 MAP1LC3B2A6NCE7 125 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 PLPP3O14495 311 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 TNFRSF10CO14798 259 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 PMP22Q01453 160 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 MAJINQ3KP22 176 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 DEGS2Q6QHC5 323 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 CCDC71LQ8N9Z2 235 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 RLN3Q8WXF3 142 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 ACY3Q96HD9 319 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 ZNF385AQ96PM9 386 aaKnown RBP8.86□□□□□ -0.99
CLDN1-201ENST00000295522 MAP1LC3BQ9GZQ8 125 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 Q9N2K0 584 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 MYO15AQ9UKN7 3530 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 TMEM210A6NLX4 147 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 PROB1E7EW31 1015 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 PITX3O75364 302 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 SERPINA7P05543 415 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 ANOS1P23352 680 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 KCNIP4Q6PIL6 250 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 TCF23Q7RTU1 214 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 CRIPAKQ8N1N5 446 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 SLC25A22Q9H936 323 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 TMEM9BQ9NQ34 198 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 KLHL13Q9P2N7 655 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 NAT8Q9UHE5 227 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 CXorf51AA0A1B0GTR3 108 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 CEACAM18A8MTB9 384 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 OR5G3P0C626 314 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 GCH1P30793 250 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 TSPAN7P41732 249 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 GPR3P46089 330 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 HINT1P49773 126 aaPredicted RBP8.86□□□□□ -0.99
CLDN1-201ENST00000295522 Q6ZN92 141 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 C16orf47Q6ZP98 133 aaPredicted RBP8.86□□□□□ -0.99
CLDN1-201ENST00000295522 GBGT1Q8N5D6 347 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 RCC1LQ96I51 464 aaKnown RBP8.86□□□□□ -0.99
CLDN1-201ENST00000295522 MRGPRX4Q96LA9 322 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 TECTBQ96PL2 329 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 SPIN2AQ99865 258 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 SPIN2BQ9BPZ2 258 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 ZDHHC11Q9H8X9 412 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 PIGLQ9Y2B2 252 aa8.86□□□□□ -0.99
CLDN1-201ENST00000295522 C3orf85A0A1B0GTC6 90 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 A0A1B0GW64 132 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 NUPR1O60356 82 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 PAX1P15863 534 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 RND2P52198 227 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 RPS21P63220 83 aaKnown RBP8.85□□□□□ -0.99
CLDN1-201ENST00000295522 GABREP78334 506 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 HSF1Q00613 529 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 RAB35Q15286 201 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 OR8G2PQ6IF36 304 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 SHISA6Q6ZSJ9 500 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 YAF2Q8IY57 180 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 ST6GALNAC3Q8NDV1 305 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 OR51H1Q8NH63 302 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 ZCCHC14Q8WYQ9 949 aaKnown RBP8.85□□□□□ -0.99
CLDN1-201ENST00000295522 ZNF160Q9HCG1 818 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 IGKV1-9A0A0C4DH69 117 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 C5orf63A6NC05 138 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 OR7C1O76099 320 aaPredicted RBP8.85□□□□□ -0.99
CLDN1-201ENST00000295522 IGHEP01854 428 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 AADACP22760 399 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 ECI1P42126 302 aa8.85□□□□□ -0.99
CLDN1-201ENST00000295522 DLX2Q07687 328 aaPredicted RBP8.85□□□□□ -0.99
CLDN1-201ENST00000295522 NOXO1Q8NFA2 376 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms