RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SPIN3Q5JUX0 258 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 FBXW12Q6X9E4 464 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 LDLRAD3Q86YD5 345 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 C17orf78Q8N4C9 275 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 SLC35G3Q8N808 338 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 GTF3AQ92664 365 aaKnown RBP17.05■□□□□ 0.32
CXCL16-201ENST00000293778 DOCK7Q96N67 2140 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 A0A1W2PR80 420 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 NUDT19A8MXV4 375 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 HS3ST1O14792 307 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 GAPDHP04406 335 aaKnown RBP17.05■□□□□ 0.32
CXCL16-201ENST00000293778 CTXN2P0C2S0 81 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 KCNJ3P48549 501 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 TMEM268Q5VZI3 342 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 OR52M1Q8NGK5 317 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 RDH5Q92781 318 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 TRIB1Q96RU8 372 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 TMEM222Q9H0R3 208 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 CDH20Q9HBT6 801 aa17.05■□□□□ 0.32
CXCL16-201ENST00000293778 J3QT63 122 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 RHBDL1O75783 438 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 JTBO76095 146 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 NOVA1P51513 510 aaKnown RBP17.04■□□□□ 0.32
CXCL16-201ENST00000293778 IDH3GP51553 393 aaPredicted RBP17.04■□□□□ 0.32
CXCL16-201ENST00000293778 DEFA5Q01523 94 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 TBC1D26Q86UD7 250 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 MRPL30Q8TCC3 161 aaKnown RBP17.04■□□□□ 0.32
CXCL16-201ENST00000293778 RTL8AQ9BWD3 113 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 SMIM3Q9BZL3 60 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 TRAV24A0A0B4J272 114 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 IGKV1-6A0A0C4DH72 117 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 GPR31O00270 319 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 SMPD2O60906 423 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 TUSC2O75896 110 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 RND3P61587 244 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 PPP1CBP62140 327 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 IGFBP7Q16270 282 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 MST1LQ2TV78 715 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 ATRAIDQ6UW56 229 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 SAT2Q96F10 170 aaPredicted RBP17.04■□□□□ 0.32
CXCL16-201ENST00000293778 LRRC46Q96FV0 321 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 MMP26Q9NRE1 261 aa17.04■□□□□ 0.32
CXCL16-201ENST00000293778 UBE2J1Q9Y385 318 aaPredicted RBP17.04■□□□□ 0.32
CXCL16-201ENST00000293778 FAM186AA6NE01 2351 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 C3orf80F5H4A9 247 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 ST8SIA3O43173 380 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 LYZL6O75951 148 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 GLAP06280 429 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 TAGLNQ01995 201 aaKnown RBP17.03■□□□□ 0.32
CXCL16-201ENST00000293778 ZNF818PQ6ZRF7 136 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 FAM214BQ7L5A3 538 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 GAPTQ8N292 157 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 MED12LQ86YW9 2145 aa17.03■□□□□ 0.32
CXCL16-201ENST00000293778 TRBV6-6A0A0A6YYG2 114 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 IGKV1D-13A0A0B4J2D9 117 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 TSPAN4O14817 238 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 IGKV1-13P0DP09 117 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 WT1P19544 449 aaPredicted RBP17.02■□□□□ 0.32
CXCL16-201ENST00000293778 AKR1C2P52895 323 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 AKR1C1Q04828 323 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 PXDC1Q5TGL8 231 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 C20orf204Q6ZNR8 217 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 ERGIC1Q969X5 290 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 SMIM8Q96KF7 97 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 OR2J1Q9GZK6 312 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 CELSR3Q9NYQ7 3312 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 TMEM218A2RU14 115 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 IGFL2Q6UWQ7 119 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 TMEM56Q96MV1 263 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 DLL3Q9NYJ7 618 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 TMEM56-RWDD3S4R434 201 aa17.02■□□□□ 0.32
CXCL16-201ENST00000293778 ARID1AO14497 2285 aa17.02■□□□□ 0.31
CXCL16-201ENST00000293778 DEGS1O15121 323 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 GPR137BO60478 399 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 FBXO24O75426 580 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 ZNF44P15621 663 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 ARHGDIBP52566 201 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 IL34Q6ZMJ4 242 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 ZNF695Q8IW36 515 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 OR4D5Q8NGN0 318 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 USB1Q9BQ65 265 aaKnown RBP17.01■□□□□ 0.31
CXCL16-201ENST00000293778 IFT22Q9H7X7 185 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 RHOFQ9HBH0 211 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 LRP5LA4QPB2 252 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 HSD17B6O14756 317 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 MED6O75586 246 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 WISP2O76076 250 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 CDS2O95674 445 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 P2RY1P47900 373 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 ERVS71-1P61550 626 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 GABRA6Q16445 453 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 GPR157Q5UAW9 335 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 CLEC9AQ6UXN8 241 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 Q6ZT83 130 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 WDR86Q86TI4 376 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 CCL28Q9NRJ3 127 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 POMT1Q9Y6A1 747 aa17.01■□□□□ 0.31
CXCL16-201ENST00000293778 TRAV17A0A0B4J275 112 aa17■□□□□ 0.31
CXCL16-201ENST00000293778 NKX2-6A6NCS4 301 aa17■□□□□ 0.31
CXCL16-201ENST00000293778 ABCD4O14678 606 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms