RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TINAGQ9UJW2 476 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 A0A0G2JNJ9 132 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 ANKRD30BLA7E2S9 258 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 NGFP01138 241 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 IGLV1-44P01699 117 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 WNT5AP41221 380 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 BTN1A1Q13410 526 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 TSC22D1Q15714 1073 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 PLCXD3Q63HM9 321 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 EIF5AL1Q6IS14 154 aaKnown RBP14.36□□□□□ -0.11
CPSF4-201ENST00000292476 DHRS11Q6UWP2 260 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 FBXW12Q6X9E4 464 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.36□□□□□ -0.11
CPSF4-201ENST00000292476 PRR7Q8TB68 274 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 BCL2L14Q9BZR8 327 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 Q9UFV3 132 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 PCDHB10Q9UN67 800 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 MPC1Q9Y5U8 109 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 SLC25A15Q9Y619 301 aa14.36□□□□□ -0.11
CPSF4-201ENST00000292476 UBR5O95071 2799 aaPredicted RBP14.35□□□□□ -0.11
CPSF4-201ENST00000292476 A0A1W2PR80 420 aa14.35□□□□□ -0.11
CPSF4-201ENST00000292476 MPTX1A8MV57 137 aa14.35□□□□□ -0.11
CPSF4-201ENST00000292476 PI3P19957 117 aa14.35□□□□□ -0.11
CPSF4-201ENST00000292476 UCP2P55851 309 aa14.35□□□□□ -0.11
CPSF4-201ENST00000292476 BPIFCQ8NFQ6 507 aa14.35□□□□□ -0.11
CPSF4-201ENST00000292476 OR56B2PQ8NGI1 322 aa14.35□□□□□ -0.11
CPSF4-201ENST00000292476 ARL11Q969Q4 196 aa14.35□□□□□ -0.11
CPSF4-201ENST00000292476 OR10C1Q96KK4 312 aa14.35□□□□□ -0.11
CPSF4-201ENST00000292476 ZNF2Q9BSG1 426 aaPredicted RBP14.35□□□□□ -0.11
CPSF4-201ENST00000292476 PAPOLGQ9BWT3 736 aaKnown RBP14.35□□□□□ -0.11
CPSF4-201ENST00000292476 CD300LBA8K4G0 201 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 SMPD2O60906 423 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 FCGR3AP08637 254 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 RAC2P15153 192 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 PPP1CBP62140 327 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 NKAPLQ5M9Q1 402 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 IL34Q6ZMJ4 242 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 MAFIPQ8WZ33 124 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 SAT2Q96F10 170 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-201ENST00000292476 GALNT14Q96FL9 552 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 CMSS1Q9BQ75 279 aaKnown RBP14.34□□□□□ -0.11
CPSF4-201ENST00000292476 SLC5A7Q9GZV3 580 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 OR5AC2Q9NZP5 309 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 AK3Q9UIJ7 227 aa14.34□□□□□ -0.11
CPSF4-201ENST00000292476 IGKV1-27A0A075B6S5 117 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 IGKV1D-8A0A087WSZ0 117 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM230AA0A1W2PPH8 454 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A10PA6NDY2 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A18PA6NE21 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A16PA6NEW6 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A20PA6NIJ5 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A8PA6NJQ4 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A7PA6NKC0 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A22PA8MWA6 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A12PA8MX19 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A5PA8MXJ8 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A23PA8MXZ1 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 TPD52L2O43399 206 aaKnown RBP14.33□□□□□ -0.11
CPSF4-201ENST00000292476 IFNA21P01568 189 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A15PP0C7V4 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A13PP0C7W8 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A14PP0C7W9 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 FAM90A24PP0C7X0 464 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 OR5H8P0DN80 308 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 UCP3P55916 312 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 RAB32Q13637 225 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 RBM39Q14498 530 aaKnown RBP14.33□□□□□ -0.11
CPSF4-201ENST00000292476 CEACAM21Q3KPI0 293 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 PXDC1Q5TGL8 231 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 ZDHHC23Q8IYP9 409 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 OSR2Q8N2R0 312 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 OR5A2Q8NGI9 324 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 OR1S2Q8NGQ3 325 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 S100PBPQ96BU1 408 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 COQ3Q9NZJ6 369 aa14.33□□□□□ -0.11
CPSF4-201ENST00000292476 TRGV8A0A0C4DH27 118 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 ZNF850A8MQ14 1090 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 PRSS44E7EML9 344 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 AGFG2O95081 481 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 APOC3P02656 99 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 CELA3BP08861 270 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 PDZK1IP1Q13113 114 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 PRDX4Q13162 271 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 LRTM2Q8N967 370 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 Q8NFD4 153 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 OR1J1Q8NGS3 322 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 SUCNR1Q9BXA5 334 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 MMP26Q9NRE1 261 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 ZFP57Q9NU63 452 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 SH3BGRL2Q9UJC5 107 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 KCNIP3Q9Y2W7 256 aa14.33□□□□□ -0.12
CPSF4-201ENST00000292476 INTS1Q8N201 2190 aaKnown RBP14.32□□□□□ -0.12
CPSF4-201ENST00000292476 C16orf97H3BN30 126 aa14.32□□□□□ -0.12
CPSF4-201ENST00000292476 PDCD6O75340 191 aa14.32□□□□□ -0.12
CPSF4-201ENST00000292476 KNG1P01042 644 aa14.32□□□□□ -0.12
CPSF4-201ENST00000292476 GAPDHP04406 335 aaKnown RBP14.32□□□□□ -0.12
CPSF4-201ENST00000292476 CECR9P0C854 216 aa14.32□□□□□ -0.12
CPSF4-201ENST00000292476 CA7P43166 264 aa14.32□□□□□ -0.12
CPSF4-201ENST00000292476 SMCO1Q147U7 214 aa14.32□□□□□ -0.12
CPSF4-201ENST00000292476 TAF9Q16594 264 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms