RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 CLDN23Q96B33 292 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 CYYR1Q96J86 154 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 ZNF391Q9UJN7 358 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 HPP00738 406 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 IL2RAP01589 272 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 CRYAAP02489 173 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 F2RL1P55085 397 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 PRAMEF5Q5TYX0 476 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 PRAMEF6Q5VXH4 476 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 ZADH2Q8N4Q0 377 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 FAM24BQ8N5W8 94 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 POLDIP2Q9Y2S7 368 aa12.67□□□□□ -0.38
CNOT9-201ENST00000273064 CHST1O43916 411 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 PJVKQ0ZLH3 352 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 GUK1Q16774 197 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 MDP1Q86V88 176 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 HOGA1Q86XE5 327 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 CALHM1Q8IU99 346 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 OR2C3Q8N628 320 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 SLC35G3Q8N808 338 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 NIPSNAP3BQ9BS92 247 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 ZNF581Q9P0T4 197 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 PLXNA2O75051 1894 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 TMEM14DPA8MWL7 114 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 FCGR3AP08637 254 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 UBE2G2P60604 165 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 SRPXP78539 464 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 OIT3Q8WWZ8 545 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 PLEKHA2Q9HB19 425 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 PSENENQ9NZ42 101 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 PSG11Q9UQ72 335 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 IFNA1P01562 189 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 HBG1P69891 147 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 HBG2P69892 147 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 ZNF154Q13106 437 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 FGFBP3Q8TAT2 258 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 LHX4Q969G2 390 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 SSX3Q99909 188 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 UNKLQ9H9P5 680 aaKnown RBP12.66□□□□□ -0.38
CNOT9-201ENST00000273064 PLEKHA3Q9HB20 300 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 SMCO4Q9NRQ5 59 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 RASL12Q9NYN1 266 aa12.66□□□□□ -0.38
CNOT9-201ENST00000273064 CLEC18AA5D8T8 446 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 CST4P01036 141 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 ECI1P42126 302 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 ZNF239Q16600 458 aaKnown RBP12.65□□□□□ -0.38
CNOT9-201ENST00000273064 NUFIP2Q7Z417 695 aaKnown RBP12.65□□□□□ -0.38
CNOT9-201ENST00000273064 CLEC18CQ8NCF0 446 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 ERGIC1Q969X5 290 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 PIK3IP1Q96FE7 263 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 TMEM100Q9NV29 134 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 UBE2L5PA0A1B0GUS4 154 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 SPINT2O43291 252 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 OR2A4O95047 310 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 CST2P09228 141 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 SNCAP37840 140 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 CXorf66Q5JRM2 361 aaPredicted RBP12.65□□□□□ -0.38
CNOT9-201ENST00000273064 FDX2Q6P4F2 183 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 ATRAIDQ6UW56 229 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 OR4A16Q8NH70 328 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 MRGPRFQ96AM1 343 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 OR2A7Q96R45 310 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 RPH3ALQ9UNE2 315 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 IGKV1D-8A0A087WSZ0 117 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 TMEM218A2RU14 115 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 B3GALNT1O75752 331 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 KLF7O75840 302 aaPredicted RBP12.65□□□□□ -0.38
CNOT9-201ENST00000273064 PPP1CBP62140 327 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 WDFY1Q8IWB7 410 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 FAM131CQ96AQ9 280 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 SARAFQ96BY9 339 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 ADGRG7Q96K78 797 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 MRPL13Q9BYD1 178 aaKnown RBP12.65□□□□□ -0.38
CNOT9-201ENST00000273064 DEPPQ9NTK1 212 aa12.65□□□□□ -0.38
CNOT9-201ENST00000273064 A0A1W2PPE3 182 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 MPPED1O15442 326 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 TLE4Q04727 773 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 RSRP1Q9BUV0 290 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
CNOT9-201ENST00000273064 ALX4Q9H161 411 aaPredicted RBP12.64□□□□□ -0.39
CNOT9-201ENST00000273064 SERTAD4Q9NUC0 356 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 ABCD4O14678 606 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 S100PP25815 95 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 ZNF718Q3SXZ3 478 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 MRPL14Q6P1L8 145 aaKnown RBP12.64□□□□□ -0.39
CNOT9-201ENST00000273064 WNT5BQ9H1J7 359 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 UQCC1Q9NVA1 299 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 AQP7O14520 342 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 AESQ08117 197 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 ZPBPQ9BS86 351 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 PROCRQ9UNN8 238 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 CSPG4Q6UVK1 2322 aa12.64□□□□□ -0.39
CNOT9-201ENST00000273064 H7C1Q1 480 aa12.63□□□□□ -0.39
CNOT9-201ENST00000273064 TAAR5O14804 337 aa12.63□□□□□ -0.39
CNOT9-201ENST00000273064 OR2C1O95371 312 aa12.63□□□□□ -0.39
CNOT9-201ENST00000273064 CTSDP07339 412 aaPredicted RBP12.63□□□□□ -0.39
CNOT9-201ENST00000273064 SP1P08047 785 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms