RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TPPPO94811 219 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 APOA1P02647 267 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 PPIAL4GP0DN37 164 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 CGB3P0DN86 165 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 CGB7P0DN87 165 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 CD99P14209 185 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 ZNF44P15621 663 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 PAX8Q06710 450 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 RBM39Q14498 530 aaKnown RBP11.79□□□□□ -0.52
SSBP1-201ENST00000265304 SLC35E4Q6ICL7 350 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 BTN2A1Q7KYR7 527 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 FGFRL1Q8N441 504 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 ST8SIA4Q92187 359 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 AP3S1Q92572 193 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 COQ2Q96H96 371 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 UNKLQ9H9P5 680 aaKnown RBP11.79□□□□□ -0.52
SSBP1-201ENST00000265304 LPAR3Q9UBY5 353 aa11.79□□□□□ -0.52
SSBP1-201ENST00000265304 LOC105371242A0A075B767 164 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 TRBV6-6A0A0A6YYG2 114 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 IGHV2-70DA0A0C4DH43 119 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 FUOMA2VDF0 154 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 SIRPB1O00241 398 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 CD5LO43866 347 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 BLVRBP30043 206 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-201ENST00000265304 SOX6P35712 828 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 P2RX3P56373 397 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 ARL6IP1Q15041 203 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 GRK1Q15835 563 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 PAN3Q58A45 887 aaKnown RBP11.78□□□□□ -0.52
SSBP1-201ENST00000265304 PLAC9Q5JTB6 97 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 RSBN1Q5VWQ0 802 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-201ENST00000265304 ZNF497Q6ZNH5 498 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 ASCC1Q8N9N2 400 aaKnown RBP11.78□□□□□ -0.52
SSBP1-201ENST00000265304 MAPK1IP1LQ8NDC0 245 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 TMEM185AQ8NFB2 350 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 OR10R2Q8NGX6 335 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 TMEM186Q96B77 213 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 KCNK7Q9Y2U2 307 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 BOLA1Q9Y3E2 137 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 INSIG2Q9Y5U4 225 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 PEX16Q9Y5Y5 336 aa11.78□□□□□ -0.52
SSBP1-201ENST00000265304 FN1P02751 2386 aaKnown RBP11.78□□□□□ -0.52
SSBP1-201ENST00000265304 MCRIP1C9JLW8 97 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 J3QLI3 93 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 MFNGO00587 321 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 ENSAO43768 121 aaKnown RBP11.77□□□□□ -0.53
SSBP1-201ENST00000265304 NAPSAO96009 420 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 RBP4P02753 201 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 MT-ND4P03905 459 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 MELTFP08582 738 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 GABRR1P24046 479 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 VEGFCP49767 419 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 SNU13P55769 128 aaKnown RBP11.77□□□□□ -0.53
SSBP1-201ENST00000265304 DLX6P56179 175 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 SCN1BQ07699 218 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 PDCD1Q15116 288 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 MOGAT2Q3SYC2 334 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 UBE2NLQ5JXB2 153 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 TMEM200BQ69YZ2 307 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 MZT2AQ6P582 158 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF880Q6PDB4 577 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 GDPD3Q7L5L3 318 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF554Q86TJ5 538 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 CMTM4Q8IZR5 234 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 KIR3DL3Q8N743 410 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 PLPPR1Q8TBJ4 325 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 NEDD4LQ96PU5 975 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 PPA2Q9H2U2 334 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 MMP26Q9NRE1 261 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 TMEM160Q9NX00 188 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 LINC00312Q9Y6C7 94 aa11.77□□□□□ -0.53
SSBP1-201ENST00000265304 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 XRCC3O43542 346 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 MNDAP41218 407 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 RPL31P62899 125 aaKnown RBP11.76□□□□□ -0.53
SSBP1-201ENST00000265304 LCN2P80188 198 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 AESQ08117 197 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 Q6ZTK2 550 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 TCF23Q7RTU1 214 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 C6orf201Q7Z4U5 140 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 SAMD12Q8N8I0 201 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 RAB3CQ96E17 227 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 S100A16Q96FQ6 103 aaKnown RBP11.76□□□□□ -0.53
SSBP1-201ENST00000265304 ARHGAP5-AS1Q96IT6 56 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 SULT4A1Q9BR01 284 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 PECRQ9BY49 303 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 RIMS4Q9H426 269 aaPredicted RBP11.76□□□□□ -0.53
SSBP1-201ENST00000265304 C19orf12Q9NSK7 152 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 MBNL3Q9NUK0 354 aaKnown RBP11.76□□□□□ -0.53
SSBP1-201ENST00000265304 TAS2R3Q9NYW6 316 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 UBE2J1Q9Y385 318 aaPredicted RBP11.76□□□□□ -0.53
SSBP1-201ENST00000265304 KPTNQ9Y664 436 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 SVEP1Q4LDE5 3571 aa11.76□□□□□ -0.53
SSBP1-201ENST00000265304 hADV38S2A0JD32 116 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 ODAMA1E959 279 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 C17orf98A8MV24 154 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 M0R1W7 72 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 TGFAP01135 160 aa11.75□□□□□ -0.53
SSBP1-201ENST00000265304 GSTP1P09211 210 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms