RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 C12orf45Q8N5I9 185 aaPredicted RBP18.88■□□□□ 0.61
SIX3-201ENST00000260653 MRPL24Q96A35 216 aaKnown RBP18.88■□□□□ 0.61
SIX3-201ENST00000260653 OR2V2Q96R30 315 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 CACNA1DQ01668 2161 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 C9orf170A2RU37 121 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 NKX2-6A6NCS4 301 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 SIX6O95475 246 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 VAMP1P23763 118 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 RBM39Q14498 530 aaKnown RBP18.88■□□□□ 0.61
SIX3-201ENST00000260653 PAN3Q58A45 887 aaKnown RBP18.88■□□□□ 0.61
SIX3-201ENST00000260653 FAHD2BQ6P2I3 314 aaPredicted RBP18.88■□□□□ 0.61
SIX3-201ENST00000260653 SSX8Q7RTT4 187 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 MRPL30Q8TCC3 161 aaKnown RBP18.88■□□□□ 0.61
SIX3-201ENST00000260653 TMEM230Q96A57 120 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 WDR89Q96FK6 387 aaPredicted RBP18.88■□□□□ 0.61
SIX3-201ENST00000260653 FAHD2AQ96GK7 314 aa18.88■□□□□ 0.61
SIX3-201ENST00000260653 RTBDNQ9BSG5 229 aaPredicted RBP18.88■□□□□ 0.61
SIX3-201ENST00000260653 ANKHD1Q8IWZ3 2542 aaKnown RBP18.87■□□□□ 0.61
SIX3-201ENST00000260653 ERVH48-1M5A8F1 160 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 GOSR2O14653 212 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 PPP3CBP16298 524 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 GLRA1P23415 457 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 IL13RA1P78552 427 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 ADAM5Q6NVV9 412 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 ZNF600Q6ZNG1 722 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 BOLA1Q9Y3E2 137 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 SH2D1BO14796 132 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 GLAP06280 429 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 H2BFSP57053 126 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 SELENOVP59797 346 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 DHRS11Q6UWP2 260 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 ACP7Q6ZNF0 438 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 PIPOXQ9P0Z9 390 aa18.87■□□□□ 0.61
SIX3-201ENST00000260653 PKDREJQ9NTG1 2253 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 FAM172BPA6NC97 362 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 HAND1O96004 215 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 TAS2R31P59538 309 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 CDSNQ15517 529 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 Q6ZS49 121 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 TMEM185AQ8NFB2 350 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 LRRC29Q8WV35 223 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 SCGB3A2Q96PL1 93 aa18.86■□□□□ 0.61
SIX3-201ENST00000260653 PTBP3O95758 552 aaKnown RBP18.85■□□□□ 0.61
SIX3-201ENST00000260653 PGAM2P15259 253 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 GRNP28799 593 aaKnown RBP18.85■□□□□ 0.61
SIX3-201ENST00000260653 ERP29P30040 261 aaKnown RBP18.85■□□□□ 0.61
SIX3-201ENST00000260653 TMEM128Q5BJH2 165 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 OR2T35Q8NGX2 323 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 PLPPR1Q8TBJ4 325 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 CASTOR1Q8WTX7 329 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 MEGF10Q96KG7 1140 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 COQ3Q9NZJ6 369 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 ATP23Q9Y6H3 246 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 HIVEP3Q5T1R4 2406 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 TFF1P04155 84 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 SCTP09683 121 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 FCGR2CP31995 323 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 SURF2Q15527 256 aaPredicted RBP18.85■□□□□ 0.61
SIX3-201ENST00000260653 DCAF12L2Q5VW00 463 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 PLSCR3Q9NRY6 295 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 SLC23A1Q9UHI7 598 aa18.85■□□□□ 0.61
SIX3-201ENST00000260653 SLC22A5O76082 557 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 CD34P28906 385 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 ZNF81P51508 661 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 ATXN7L3Q14CW9 347 aaPredicted RBP18.84■□□□□ 0.61
SIX3-201ENST00000260653 SRSF7Q16629 238 aaKnown RBP eCLIP18.84■□□□□ 0.61
SIX3-201ENST00000260653 LIN54Q6MZP7 749 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 C11orf88Q6PI97 169 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 OR11H4Q8NGC9 324 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 TRAF4Q9BUZ4 470 aaPredicted RBP18.84■□□□□ 0.61
SIX3-201ENST00000260653 RIMS4Q9H426 269 aaPredicted RBP18.84■□□□□ 0.61
SIX3-201ENST00000260653 G3V3Q6 166 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 OR2A4O95047 310 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 RCC1P18754 421 aaPredicted RBP18.84■□□□□ 0.61
SIX3-201ENST00000260653 ADIPOQQ15848 244 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 FBXL19-AS1Q494R0 122 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 Q5BKY6 102 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 ITLN1Q8WWA0 313 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 TOMM40LQ969M1 308 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 OR2A7Q96R45 310 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 DECR2Q9NUI1 292 aa18.84■□□□□ 0.61
SIX3-201ENST00000260653 PSPNO60542 156 aa18.83■□□□□ 0.61
SIX3-201ENST00000260653 GIPP09681 153 aaPredicted RBP18.83■□□□□ 0.61
SIX3-201ENST00000260653 EGR1P18146 543 aa18.83■□□□□ 0.61
SIX3-201ENST00000260653 NFYAP23511 347 aaPredicted RBP18.83■□□□□ 0.61
SIX3-201ENST00000260653 FXYD4P59646 89 aa18.83■□□□□ 0.61
SIX3-201ENST00000260653 HERPUD1Q15011 391 aa18.83■□□□□ 0.61
SIX3-201ENST00000260653 MOGAT3Q86VF5 341 aa18.83■□□□□ 0.61
SIX3-201ENST00000260653 MITD1Q8WV92 249 aa18.83■□□□□ 0.61
SIX3-201ENST00000260653 FXYD6Q9H0Q3 95 aa18.83■□□□□ 0.61
SIX3-201ENST00000260653 NGBQ9NPG2 151 aa18.83■□□□□ 0.61
SIX3-201ENST00000260653 TRBV6-6A0A0A6YYG2 114 aa18.83■□□□□ 0.6
SIX3-201ENST00000260653 KNG1P01042 644 aa18.83■□□□□ 0.6
SIX3-201ENST00000260653 OR4A8P0C604 315 aa18.83■□□□□ 0.6
SIX3-201ENST00000260653 DHODHQ02127 395 aa18.83■□□□□ 0.6
SIX3-201ENST00000260653 SMIM21Q3B7S5 101 aa18.83■□□□□ 0.6
SIX3-201ENST00000260653 RNASE6Q93091 150 aaKnown RBP18.83■□□□□ 0.6
SIX3-201ENST00000260653 HYLS1Q96M11 299 aa18.83■□□□□ 0.6
SIX3-201ENST00000260653 TRDCB7Z8K6 153 aa18.82■□□□□ 0.6
SIX3-201ENST00000260653 IGHV1-46P01743 117 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms