RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 EXT1Q16394 746 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 TMEM241Q24JQ0 296 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 GAB4Q2WGN9 574 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 C9orf50Q5SZB4 431 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 FAM180AQ6UWF9 173 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 DTX1Q86Y01 620 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 C20orf196Q8IYI0 205 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 PLPPR1Q8TBJ4 325 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 RPUSD4Q96CM3 377 aaKnown RBP11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 CFHR5Q9BXR6 569 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 GAL3ST2Q9H3Q3 398 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 NECAP2Q9NVZ3 263 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 PRSS38A1L453 326 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 NPIPA5E9PKD4 350 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 ITGB1BP1O14713 200 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 SLC31A1O15431 190 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 HRASP01112 189 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 GP1BBP13224 206 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 HIST1H3AP68431 136 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 POU3F1Q03052 451 aaPredicted RBP11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 IL24Q13007 206 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 MMDQ15546 238 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 PRTGQ2VWP7 1150 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 RABEPKQ7Z6M1 372 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 OR2T10Q8NGZ9 312 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 OR1E3Q8WZA6 343 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 ALKBH3Q96Q83 286 aaPredicted RBP11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 NPIPA1Q9UND3 350 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 LHFPL6Q9Y693 200 aa11.52□□□□□ -0.57
TUBGCP4-201ENST00000260383 H3BP45 60 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 TRAPPC6AO75865 159 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 RSPO4Q2I0M5 234 aaPredicted RBP11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 TPTE2P1Q5T6R2 138 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 DNM1P34Q6PK57 102 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 DPPA3Q6W0C5 159 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 CYP2G1PQ6ZSU1 146 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 Q6ZVH6 145 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 Q6ZWC4 215 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 CENPVQ7Z7K6 275 aaPredicted RBP11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 TSACCQ96A04 125 aaPredicted RBP11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 ZNF845Q96IR2 970 aaPredicted RBP11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 TM2D1Q9BX74 207 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 TBL1XR1Q9BZK7 514 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 ATG2BQ96BY7 2078 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 ARHGAP21Q5T5U3 1957 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 C20orf202A1L168 122 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 ADAM20O43506 726 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 CHST1O43916 411 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 FCGR2AP12318 317 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 CDAP32320 146 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 CDKN1AP38936 164 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 MTCP1P56278 107 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 KCNMB1Q16558 191 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 LEMD1Q68G75 181 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 STPG4Q8N801 248 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 OR1L6Q8NGR2 347 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 PIGTQ969N2 578 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 ATP5SQ99766 215 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 ZBP1Q9H171 429 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 PCED1AQ9H1Q7 454 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 RNF150Q9ULK6 438 aa11.51□□□□□ -0.57
TUBGCP4-201ENST00000260383 MUC22E2RYF6 1773 aaPredicted RBP11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 A0A1W2PQU0 124 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 CDS2O95674 445 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 PGCP20142 388 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 CDKN1BP46527 198 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 SLC6A8P48029 635 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 PTTG1IPP53801 180 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 IGLV3-21P80748 117 aaPredicted RBP11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 CST6Q15828 149 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 C2orf27AQ580R0 203 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 SLC35E1Q96K37 410 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 P2RX4Q99571 388 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 NUDT22Q9BRQ3 303 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 TMEM106BQ9NUM4 274 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 C3orf85A0A1B0GTC6 90 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 C17orf105B2RV13 164 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 AQP7O14520 342 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 RER1O15258 196 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 SELENOTP62341 195 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 MFAP5Q13361 173 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 SLC25A24Q6NUK1 477 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 OR2V1Q8NHB1 315 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 NAT6Q93015 286 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 OR51I2Q9H344 312 aa11.5□□□□□ -0.57
TUBGCP4-201ENST00000260383 KNL1Q8NG31 2342 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 NKX6-3A6NJ46 265 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 PAX9P55771 341 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 LHX8Q68G74 356 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 UEVLDQ8IX04 471 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 CISD2Q8N5K1 135 aaKnown RBP11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 SIGLEC12Q96PQ1 595 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 HRASLS2Q9NWW9 162 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 YLPM1P49750 1951 aaKnown RBP11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 TRBV11-1A0A0K0K1C0 115 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 GRIFINA4D1Z8 144 aa11.49□□□□□ -0.57
TUBGCP4-201ENST00000260383 H0Y8X5 98 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms