RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 FAM230AA0A1W2PPH8 454 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 NDUFA2O43678 99 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 RHBDL1O75783 438 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 MECP2P51608 486 aaKnown RBP13.99□□□□□ -0.17
SDCBP-201ENST00000260130 FUT6P51993 359 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 TAS2R20P59543 309 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 RAP2BP61225 183 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 MICBQ29980 383 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 LYPD2Q6UXB3 125 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 FAM90A1Q86YD7 464 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 NPRL2Q8WTW4 380 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 NEIL1Q96FI4 390 aaPredicted RBP13.99□□□□□ -0.17
SDCBP-201ENST00000260130 ZNF69Q9UC07 566 aa13.99□□□□□ -0.17
SDCBP-201ENST00000260130 TRAV20A0A0B4J274 112 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.98□□□□□ -0.17
SDCBP-201ENST00000260130 FOXH1O75593 365 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 NDUFB6O95139 128 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 MUC1P15941 1255 aaPredicted RBP13.98□□□□□ -0.17
SDCBP-201ENST00000260130 SEC61A1P61619 476 aaKnown RBP13.98□□□□□ -0.17
SDCBP-201ENST00000260130 LCN2P80188 198 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 CNN3Q15417 329 aaKnown RBP13.98□□□□□ -0.17
SDCBP-201ENST00000260130 SEC22CQ9BRL7 303 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 CHIAQ9BZP6 476 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 DHDHQ9UQ10 334 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.98□□□□□ -0.17
SDCBP-201ENST00000260130 FN1P02751 2386 aaKnown RBP13.98□□□□□ -0.17
SDCBP-201ENST00000260130 IGHV3OR15-7A0A075B7D8 119 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 TNFRSF13BO14836 293 aaPredicted RBP13.98□□□□□ -0.17
SDCBP-201ENST00000260130 RRASP10301 218 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 ZFP36P26651 326 aaKnown RBP13.98□□□□□ -0.17
SDCBP-201ENST00000260130 GMFBP60983 142 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 OPCMLQ14982 345 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 ZNF626Q68DY1 528 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 OR8B3Q8NGG8 313 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 OR8B2Q96RD0 313 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 WDR13Q9H1Z4 485 aa13.98□□□□□ -0.17
SDCBP-201ENST00000260130 SONP18583 2426 aaKnown RBP13.97□□□□□ -0.17
SDCBP-201ENST00000260130 IGKV1-9A0A0C4DH69 117 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 J3QT63 122 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 GYPAP02724 150 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 AANATQ16613 207 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 LRRTM1Q86UE6 522 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 ANGPTL5Q86XS5 388 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 DNAAF1Q8NEP3 725 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 GPR148Q8TDV2 347 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 TSEN15Q8WW01 171 aaKnown RBP13.97□□□□□ -0.17
SDCBP-201ENST00000260130 THRSPQ92748 146 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 SEH1LQ96EE3 360 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 BORCS8Q96FH0 119 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 SSBP3Q9BWW4 388 aaPredicted RBP13.97□□□□□ -0.17
SDCBP-201ENST00000260130 TMPRSS13Q9BYE2 586 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 TAS2R8Q9NYW2 309 aa13.97□□□□□ -0.17
SDCBP-201ENST00000260130 CRLF1O75462 422 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 RBBP9O75884 186 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 ALDOBP05062 364 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 ADRA2CP18825 462 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 GLRA1P23415 457 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 SOX2P48431 317 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 CR1LQ2VPA4 569 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 CALHM1Q8IU99 346 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 OR5D14Q8NGL3 314 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 DNAJB11Q9UBS4 358 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 KIF25Q9UIL4 384 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 POLDIP2Q9Y2S7 368 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 MALRD1Q5VYJ5 2156 aa13.96□□□□□ -0.17
SDCBP-201ENST00000260130 A8MXK9 166 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 L7N2F9 121 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 PHF1O43189 567 aaPredicted RBP13.96□□□□□ -0.18
SDCBP-201ENST00000260130 ADAM20O43506 726 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 XRCC3O43542 346 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 SYNGR1O43759 233 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 OR2A4O95047 310 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 CFDP00746 253 aaPredicted RBP13.96□□□□□ -0.18
SDCBP-201ENST00000260130 ANXA7P20073 488 aaKnown RBP13.96□□□□□ -0.18
SDCBP-201ENST00000260130 PRKACBP22694 351 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 MPZP25189 248 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 RBP2P50120 134 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 GNB2P62879 340 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 ZNF841Q6ZN19 808 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 OR2A7Q96R45 310 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 PKIBQ9C010 78 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 PIPOXQ9P0Z9 390 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 STEAP1Q9UHE8 339 aa13.96□□□□□ -0.18
SDCBP-201ENST00000260130 POLR3KQ9Y2Y1 108 aaPredicted RBP13.96□□□□□ -0.18
SDCBP-201ENST00000260130 IGKV1-27A0A075B6S5 117 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 TRBV5-7A0A0A0MS05 114 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 UBE2QL1A1L167 161 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 NFYAP23511 347 aaPredicted RBP13.95□□□□□ -0.18
SDCBP-201ENST00000260130 ATP1B3P54709 279 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 RBMS2Q15434 407 aaKnown RBP13.95□□□□□ -0.18
SDCBP-201ENST00000260130 FAM120AOSQ5T036 256 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 FAHD2BQ6P2I3 314 aaPredicted RBP13.95□□□□□ -0.18
SDCBP-201ENST00000260130 OR13C9Q8NGT0 318 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 SPSB1Q96BD6 273 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 FAHD2AQ96GK7 314 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 SHARPINQ9H0F6 387 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 CLN8Q9UBY8 286 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 CDC42EP3Q9UKI2 254 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 PPIAL4CA0A0B4J2A2 164 aa13.95□□□□□ -0.18
SDCBP-201ENST00000260130 KIAA1324LA8MWY0 1029 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms