RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 ZNF488Q96MN9 340 aa19.46■□□□□ 0.71
HOXD9-201ENST00000249499 ARPC5LQ9BPX5 153 aa19.46■□□□□ 0.71
HOXD9-201ENST00000249499 NRIP2Q9BQI9 281 aa19.46■□□□□ 0.71
HOXD9-201ENST00000249499 OPN3Q9H1Y3 402 aaPredicted RBP19.46■□□□□ 0.71
HOXD9-201ENST00000249499 TMEM100Q9NV29 134 aa19.46■□□□□ 0.71
HOXD9-201ENST00000249499 TUBD1Q9UJT1 453 aa19.46■□□□□ 0.71
HOXD9-201ENST00000249499 PURGQ9UJV8 347 aaKnown RBP19.46■□□□□ 0.71
HOXD9-201ENST00000249499 DEGS1O15121 323 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 NMBP08949 121 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 HOXB5P09067 269 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 NUP62P37198 522 aaPredicted RBP19.45■□□□□ 0.7
HOXD9-201ENST00000249499 RND3P61587 244 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 ZNF154Q13106 437 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 ATXN7L3Q14CW9 347 aaPredicted RBP19.45■□□□□ 0.7
HOXD9-201ENST00000249499 C3orf36Q3SXR2 165 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 IGSF11Q5DX21 431 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 SPIN3Q5JUX0 258 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 Q6P435 159 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 MOB1BQ7L9L4 216 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 SLC25A32Q9H2D1 315 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 CFAP47Q6ZTR5 3102 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 MPTX1A8MV57 137 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 TUSC2O75896 110 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 AGFG2O95081 481 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 SPDEFO95238 335 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 SRPXP78539 464 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 ZNF146Q15072 292 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 MBNL2Q5VZF2 373 aaKnown RBP19.45■□□□□ 0.7
HOXD9-201ENST00000249499 OR5T2Q8NGG2 359 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 PCDHB10Q9UN67 800 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 FAM215AQ9Y5M1 114 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 ACACBO00763 2458 aa19.45■□□□□ 0.7
HOXD9-201ENST00000249499 H0YIZ8 118 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 DUSP1P28562 367 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 MPV17P39210 176 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 KCNJ3P48549 501 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 THOC7Q6I9Y2 204 aaKnown RBP19.44■□□□□ 0.7
HOXD9-201ENST00000249499 LIAT1Q6ZQX7 453 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 OR4A4PQ8NGN8 299 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 ANGPTL6Q8NI99 470 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 AQP10Q96PS8 301 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 SLC25A15Q9Y619 301 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 APC2O95996 2303 aa19.44■□□□□ 0.7
HOXD9-201ENST00000249499 OR5AC1P0C628 307 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 IAH1Q2TAA2 248 aaPredicted RBP19.43■□□□□ 0.7
HOXD9-201ENST00000249499 ZNF718Q3SXZ3 478 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 FIP1L1Q6UN15 594 aaKnown RBP19.43■□□□□ 0.7
HOXD9-201ENST00000249499 LGI3Q8N145 548 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 STOML3Q8TAV4 291 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 CXXC4Q9H2H0 198 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 ACACAQ13085 2346 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 IGHV2OR16-5A0A0B4J2B6 119 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 IGHV1-18A0A0C4DH31 117 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 A0A1B0GW55 424 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 A0A1B0GWJ7 208 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 DUX4L2P0CJ85 424 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 DUX4L3P0CJ86 424 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 DUX4L4P0CJ87 422 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 DUX4L5P0CJ88 424 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 DUX4L6P0CJ89 424 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 DUX4L7P0CJ90 424 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 NAAAQ02083 359 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 ALKBH6Q3KRA9 238 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 GGNBP1Q5YKI7 109 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 LDLRAD3Q86YD5 345 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 GAPTQ8N292 157 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 CABLES2Q9BTV7 478 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 SFXN3Q9BWM7 321 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 C1QTNF6Q9BXI9 259 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 ZFP57Q9NU63 452 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 DUX4Q9UBX2 424 aa19.43■□□□□ 0.7
HOXD9-201ENST00000249499 FBXO9Q9UK97 447 aaPredicted RBP19.43■□□□□ 0.7
HOXD9-201ENST00000249499 ZZEF1O43149 2961 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 RLN2P04090 185 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 SCTP09683 121 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 ZNF44P15621 663 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 HLA-DRB3P79483 266 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 RAB32Q13637 225 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 HERPUD1Q15011 391 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 TIMM23BQ5SRD1 257 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 RGS7BPQ6MZT1 257 aaPredicted RBP19.42■□□□□ 0.7
HOXD9-201ENST00000249499 FAM180AQ6UWF9 173 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 FAM57AQ8TBR7 257 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 MSI2Q96DH6 328 aaKnown RBP19.42■□□□□ 0.7
HOXD9-201ENST00000249499 C18orf12Q96KH6 178 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 ZNF471Q9BX82 626 aaPredicted RBP19.42■□□□□ 0.7
HOXD9-201ENST00000249499 TLNRD1Q9H1K6 362 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 HES4Q9HCC6 221 aa19.42■□□□□ 0.7
HOXD9-201ENST00000249499 NPIPB11E5RHQ5 1161 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 HSPB6O14558 160 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 HS3ST1O14792 307 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 ZNF205O95201 554 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 LUMP51884 338 aaPredicted RBP19.41■□□□□ 0.7
HOXD9-201ENST00000249499 MZT1Q08AG7 82 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 PHLDA2Q53GA4 152 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 PDZD9Q8IXQ8 264 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 PCNPQ8WW12 178 aaKnown RBP19.41■□□□□ 0.7
HOXD9-201ENST00000249499 RDH5Q92781 318 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 CNTNAP3BQ96NU0 1288 aa19.41■□□□□ 0.7
HOXD9-201ENST00000249499 CNTNAP3Q9BZ76 1288 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms