RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 LRTM2Q8N967 370 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.74□□□□□ -1.33
CXCR4-201ENST00000241393 BPIFCQ8NFQ6 507 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 OR5T2Q8NGG2 359 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 OR1S2Q8NGQ3 325 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 OR10D3Q8NH80 312 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 FNDC9Q8TBE3 224 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 RRNAD1Q96FB5 475 aaKnown RBP6.74□□□□□ -1.33
CXCR4-201ENST00000241393 GALNT14Q96FL9 552 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF845Q96IR2 970 aaPredicted RBP6.74□□□□□ -1.33
CXCR4-201ENST00000241393 OR10C1Q96KK4 312 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 CMSS1Q9BQ75 279 aaKnown RBP6.74□□□□□ -1.33
CXCR4-201ENST00000241393 ELOVL1Q9BW60 279 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 LINC00470Q9BZP3 86 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 OR2H1Q9GZK4 316 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 SLC5A7Q9GZV3 580 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 MMP26Q9NRE1 261 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF701Q9NV72 531 aaPredicted RBP6.74□□□□□ -1.33
CXCR4-201ENST00000241393 BOKQ9UMX3 212 aaPredicted RBP6.74□□□□□ -1.33
CXCR4-201ENST00000241393 SLC7A11Q9UPY5 501 aa6.74□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF816-ZNF321PA0A0X1KG74 233 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 TMEM218A2RU14 115 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 TRIM77I1YAP6 450 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 CXCL13O43927 109 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 FARS2O95363 451 aaKnown RBP6.73□□□□□ -1.33
CXCR4-201ENST00000241393 NRASP01111 189 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 FCGR3AP08637 254 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 OR5H8P0DN80 308 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 COX5BP10606 129 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 GABRR1P24046 479 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 CYB561P49447 251 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 PSG4Q00888 419 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 RBM39Q14498 530 aaKnown RBP6.73□□□□□ -1.33
CXCR4-201ENST00000241393 SMCO1Q147U7 214 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 SRSF7Q16629 238 aaKnown RBP eCLIP6.73□□□□□ -1.33
CXCR4-201ENST00000241393 SMUG1Q53HV7 270 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 C10orf91Q5T1B1 145 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 UNQ6126/PRO20091Q6UXV3 157 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 COLCA1Q6ZS62 124 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 OSR2Q8N2R0 312 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 ESX1Q8N693 406 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 Q8NFD4 153 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 MED12Q93074 2177 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF2Q9BSG1 426 aaPredicted RBP6.73□□□□□ -1.33
CXCR4-201ENST00000241393 DDA1Q9BW61 102 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 SUCNR1Q9BXA5 334 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 C1QTNF5Q9BXJ0 243 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 STRADBQ9C0K7 418 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 WNT5BQ9H1J7 359 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 PLEKHA2Q9HB19 425 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 OR5AC2Q9NZP5 309 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 KCNIP3Q9Y2W7 256 aa6.73□□□□□ -1.33
CXCR4-201ENST00000241393 IGKV1-27A0A075B6S5 117 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 IGKV1D-8A0A087WSZ0 117 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 A0A0G2JMM0 328 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 A0A1W2PPB8 328 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 FAM230AA0A1W2PPH8 454 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 A0A1W2PRS3 328 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 MSGN1A6NI15 193 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 KIR3DP1A8MWS1 328 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 RPL36A-HNRNPH2H7BZ11 118 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 ABCD4O14678 606 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 TSPAN4O14817 238 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 PDCD6O75340 191 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 ATG12O94817 140 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 CST4P01036 141 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 FSHBP01225 129 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 MMP7P09237 267 aaPredicted RBP6.72□□□□□ -1.33
CXCR4-201ENST00000241393 FAM157CP0CG43 387 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 OTX2P32243 289 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 RGS19P49795 217 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 FAM3AP98173 230 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 Q0VFX4 171 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 PDZK1IP1Q13113 114 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 IAH1Q2TAA2 248 aaPredicted RBP6.72□□□□□ -1.33
CXCR4-201ENST00000241393 CEACAM16Q2WEN9 425 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 TMEM211Q6ICI0 200 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 FAM122CQ6P4D5 195 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 Q6ZS49 121 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 TMEM200AQ86VY9 491 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 SAXO1Q8IYX7 474 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 SVBPQ8N300 66 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 OR2AE1Q8NHA4 323 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 CT55Q8WUE5 264 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 SMIM8Q96KF7 97 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 ALKBH3Q96Q83 286 aaPredicted RBP6.72□□□□□ -1.33
CXCR4-201ENST00000241393 NKX6-2Q9C056 277 aaPredicted RBP6.72□□□□□ -1.33
CXCR4-201ENST00000241393 KLK15Q9H2R5 256 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 NAA60Q9H7X0 242 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 RNF122Q9H9V4 155 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF286AQ9HBT8 521 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 C12orf4Q9NQ89 552 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 ZC4H2Q9NQZ6 224 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 ASF1BQ9NVP2 202 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 COQ3Q9NZJ6 369 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 AK3Q9UIJ7 227 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 CARHSP1Q9Y2V2 147 aaKnown RBP6.72□□□□□ -1.33
CXCR4-201ENST00000241393 LOXL2Q9Y4K0 774 aa6.72□□□□□ -1.33
CXCR4-201ENST00000241393 POMT1Q9Y6A1 747 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms