RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 RIPPLY3P57055 190 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 TSPAN5P62079 268 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 IKZF1Q13422 519 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 DMRTC1Q5HYR2 192 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 SLC36A1Q7Z2H8 476 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 PEG10Q86TG7 708 aaKnown RBP11.16□□□□□ -0.62
SLIRP-201ENST00000238688 GLCCI1Q86VQ1 547 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 TGIF2LYQ8IUE0 185 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 KRTAP1-3Q8IUG1 177 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 GAPTQ8N292 157 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 GVQW1Q8N7I0 195 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 DRAXINQ8NBI3 349 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-201ENST00000238688 OR4D10Q8NGI6 311 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 LILRB1Q8NHL6 650 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-201ENST00000238688 DVL3Q92997 716 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-201ENST00000238688 ST6GAL2Q96JF0 529 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 SULT4A1Q9BR01 284 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 ZNF701Q9NV72 531 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-201ENST00000238688 ELF5Q9UKW6 265 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-201ENST00000238688 NPTNQ9Y639 398 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 USF3Q68DE3 2245 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 NF1P21359 2839 aa11.16□□□□□ -0.62
SLIRP-201ENST00000238688 SSNA1O43805 119 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 CD55P08174 381 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 DNASE1P24855 282 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 GLP1RP43220 463 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 KCNJ8Q15842 424 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 ATAD3CQ5T2N8 411 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 FAAP20Q6NZ36 180 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 DHRS11Q6UWP2 260 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 SLC25A42Q86VD7 318 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 TMEM185AQ8NFB2 350 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 OR4S1Q8NGB4 309 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 OR13C8Q8NGS7 320 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 ZFAND1Q8TCF1 268 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 ZNF431Q8TF32 576 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-201ENST00000238688 FAM216AQ8WUB2 273 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 FAAP24Q9BTP7 215 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 ST6GALNAC5Q9BVH7 336 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 FN3KRPQ9HA64 309 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 DLL4Q9NR61 685 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 CA10Q9NS85 328 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 IL19Q9UHD0 177 aa11.15□□□□□ -0.62
SLIRP-201ENST00000238688 A0A0B4J2A0 478 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 ATP6V1G2-DDX39BF2Z307 99 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 DEGS1O15121 323 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 RGS11O94810 467 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 ERP29P30040 261 aaKnown RBP11.14□□□□□ -0.63
SLIRP-201ENST00000238688 EIF2B2P49770 351 aaKnown RBP11.14□□□□□ -0.63
SLIRP-201ENST00000238688 UCP3P55916 312 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 CBX3Q13185 183 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 ZFP69Q49AA0 526 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 SCGB2B2Q4G0G5 96 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 ATPAF1Q5TC12 328 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-201ENST00000238688 OR52W1Q6IF63 320 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 TRAT1Q6PIZ9 186 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 Q6ZR03 302 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 WDR86Q86TI4 376 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 PPP1R35Q8TAP8 253 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 Q8TCH9 128 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 DACT3Q96B18 629 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF486Q96H40 463 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-201ENST00000238688 DPCDQ9BVM2 203 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-201ENST00000238688 RANBP3Q9H6Z4 567 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-201ENST00000238688 EHFQ9NZC4 300 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 SHPKQ9UHJ6 478 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 ATP23Q9Y6H3 246 aa11.14□□□□□ -0.63
SLIRP-201ENST00000238688 SRRM5B3KS81 715 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 NPIPB11E5RHQ5 1161 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 CDIPTO14735 213 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 C1QBP02746 253 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 CSN2P05814 226 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 THBDP07204 575 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 OR4E1P0C645 316 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 GSTT2P0CG29 244 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 OR5H8P0DN80 308 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 CD99P14209 185 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 TNFRSF1AP19438 455 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 DEFB113Q30KQ7 82 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 ALKBH6Q3KRA9 238 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 BEX5Q5H9J7 111 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 NCMAPQ5T1S8 102 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 Q6P435 159 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 WDR82Q6UXN9 313 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 WFDC8Q8IUA0 241 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 SUMF2Q8NBJ7 301 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 ELMOD3Q96FG2 381 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 VRK1Q99986 396 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-201ENST00000238688 NCOR1P1Q9H4R4 102 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 Q9N2K0 584 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 OPN4Q9UHM6 478 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 DUSP13Q9UII6 198 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 PCDHB10Q9UN67 800 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 GPR132Q9UNW8 380 aa11.13□□□□□ -0.63
SLIRP-201ENST00000238688 MEIKINA0A087WXM9 373 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 DPRXA6NFQ7 191 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 A6NLC8 198 aa11.12□□□□□ -0.63
SLIRP-201ENST00000238688 F5H5P2 479 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms